Solea senegalensis (Senegalese sole): 122773648
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Entry
122773648 CDS
T07721
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122773648 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122773648 (rabgef1l)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122773648 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
122773648 (rabgef1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
122773648
NCBI-ProteinID:
XP_043888404
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All DBs
Position
LG8:complement(10681388..10686891)
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AA seq
506 aa
AA seq
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MMSQRRGIHLDQSELLCKKGCGFYGNNAWHGFCSKCWREENQREKQKQIQEDWALAERLQ
REEEEAYASRNQKAQSQPTITPFNKFEERKTKEKSSKVHTVTKFFIPSTKTPPRKDAASL
DTQSSPSPSSSASRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTETMVYKRDMAAD
ELSECVQDFYQNLSDRLQTQFKGSSDHVESIMDEVEKYMMTRLYKEVFCPETTDDENKDL
AIQKRIRDLHWVTIEMLCVPVDEEIPEVSDSVVKAITDVIEMDSKRVPKDKLACITRCSK
HIFNAIKVSKKEAASADDFLPTLIYIVLKANPPRLHSNIQYITRFCNPSRLMTGEDGYYF
TNLCCAVAFIEKLDGQSLNLSTEEFDLYMSGKASPHWPQTSGASSSSPGGTAFNQVHKRL
DLLTGLGERQERVIEKARQLESDLIDWTDEVEQKVQSVLESFSPEAQNPAATAASGTTSA
ASSAIDSDNVENELLPPPLQPQVFAG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccagcggcgtggtatccatctggaccaatcggagctgctttgcaagaaagga
tgtggtttttatggcaacaatgcctggcacggcttttgttctaagtgctggcgagaggag
aatcagcgagaaaagcaaaaacagattcaagaagactgggcacttgcagaaaggcttcag
agagaggaggaggaagcatatgcaagcagaaatcagaaggcccagtctcagccaacaatc
actcccttcaataagtttgaggaaagaaaaacaaaagaaaagtccagcaaagttcacaca
gtcacaaagttttttattccttccacaaaaacaccaccaagaaaagatgctgcttcctta
gatacacagtccagcccgagcccgagctcctctgcaagtcgacattcctctgtggacagc
gatcacgcaacccgagagttcattgattttctcaagcctctgaagtctggcagggagatc
ttcaaacagtgccgggccttcacggagaccatggtctacaagcgagacatggccgctgat
gagctgtcggagtgtgtgcaagacttctatcagaacctctcagatcgtctccagacccag
ttcaaaggttcctcagatcatgtagagagtattatggatgaagtagagaaatacatgatg
acccgtctttataaggaagtgttctgtcctgagaccacagatgatgagaacaaagacctg
gccattcagaagagaatcagagacttgcactgggtcactattgagatgctgtgtgttcct
gtagatgaggagatcccagaggtttctgacagtgtcgtcaaagccatcacagatgtaatt
gaaatggattcaaagcgtgtgcccaaggacaaactggcttgcatcactcgttgcagcaag
cacatcttcaacgccatcaaagtcagcaagaaagaggctgcgtctgctgacgacttcctc
cccacactcatctacatcgtgttgaaagcaaaccctccacgactacactccaacattcag
tacatcacccgcttctgcaaccccagcagactcatgacgggagaggatggttactacttc
actaatttgtgttgtgcagtggccttcattgagaagctggatggtcagtccctgaacctg
agcactgaggagtttgatctctacatgtcgggcaaagcgtcccctcactggccacaaaca
agtggagcttcttcctcctccccgggtggcactgctttcaatcaggtccacaaacggctg
gacctgctcacagggctcggggaaaggcaagagcgagtcatagagaaggctcgacaactt
gagagcgacctgattgactggacagatgaggtagagcagaaggtgcagagtgttctggaa
agcttttcaccagaggcacaaaaccctgctgcaaccgcggctagtgggacgacgtctgcg
gcctcgtcagctattgactctgataatgtggagaacgagctcctgcctccaccactgcaa
ccacaagtgtttgctggttga
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