Solea senegalensis (Senegalese sole): 122773793
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Entry
122773793 CDS
T07721
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122773793 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122773793 (dhx36)
03012 Translation factors [BR:
ssen03012
]
122773793 (dhx36)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122773793 (dhx36)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122773793 (dhx36)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122773793 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122773793
NCBI-ProteinID:
XP_043888648
LinkDB
All DBs
Position
LG8:complement(868219..878454)
Genome browser
AA seq
1061 aa
AA seq
DB search
MSYSHRGGRRGGRGGRGHRDGSRERWDRGGGGGGGGERGGGGERGGERGGGGGGGEHRDR
DRPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEDREQHITQLLHSVQREQPLPD
RHHRHATVCQSDSWTTDDDSHCYFDGDLPEEQKLKLDIKSEEEEELSLDHKKSSSKSHGH
STTTVDKDGPPDRWDEDDHQEEEKEEDRRTLRSKDKDVEFLFQEVVRDTSLDNDLMRDFM
SKKSDPKYREMLKFREKLPSYGKKEELVELIRSNRVLVVSGETGCGKTTQVTQFILDDYI
NRGMGSLCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRKQGSVLY
CTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLIIVKDLLKLRDDLKIILMSATL
NAEKFSKYFDNCPMIHIPGSTFPVDEFLLEDIVEMTRYRPQNQDRRPSWKRGFWQGQNSR
PEKEEKEAEYKDKWPLYEHALRGRYSDNTITTLQMLDNNDKIDLELILALIRYIVLHEQE
GAILVFLPGWDNISSLNDLLMAQQMFKSERFIIIPLHSLMPTVNQTQVFKRPPPGVTKIV
IATNIAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSVANAKQRKGRAGRVRP
GKCYHLYNGLRAELLDDYQLPEIMRTPLEELCLQIKILKLGSIARFLEKAPDPPTENAIN
LAIKNLMDLNALDRSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFK
DPFFIPLGKEKMADMRRKTLSRNSKSDHLTIVNAFQGWEETKQRGVRYEREYCWDNFLSA
NTLQMLHNMKAQFAEHLMHVGFVSSKNPKDPKSNINSDNEKLIKAVIVAGLYPKVAMIRP
SHSRKRPGVKVYTQADGKVCIHPKSVNAEETDFNYTWLIYHLKMKTSSIFLYDCTEVSPF
SLLFFGGDISIQRDEDQDTIAVDKWIVFRSPARIAHLVKSLKKELDSLLEEKIRNPSPVD
WNNRQSKDCAVITAIIDLITTQEKSTSAPRGQHLHFTDDND
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagtcacagaggaggaagaagaggaggacgaggaggacgaggacacagagat
gggagcagagaacggtgggaccgaggaggaggaggaggaggaggaggagaacgaggagga
ggaggagaacgaggaggagaacgaggaggaggaggaggaggaggagaacaccgggaccgg
gaccggcctcctcctcacctgaagggccgtgagatcggactgtggtacgccaggtacgga
gcagtgaggaggaaacaggcggacaggagatcgcgagccgtggtccagatggacgaggac
agagagcagcacatcactcagctgcttcacagtgttcagagagagcagccgttaccagac
agacaccacagacacgcgactgtctgtcagtctgacagctggacgacagacgacgacagt
cactgttactttgatggggatttgcctgaagagcagaaactgaagcttgacattaaatct
gaagaggaggaagaacttagtctggaccacaagaaatcctcttcaaaatcacacggacac
tcaactacaacagtcgataaagatggacctccagacaggtgggatgaagatgatcatcag
gaggaggagaaggaggaggacagacggacactgagaagcaaagacaaggatgtagagttc
ttgtttcaggaagtagtcagagacacttccctggacaatgacttgatgagagacttcatg
agcaagaaatcagatccaaagtacagagaaatgctgaaattcagggaaaaattaccatct
tacggcaaaaaagaggagctggtggagctgatccgcagtaaccgtgtgttggttgtgagt
ggagagactggctgtggtaaaactactcaggtcacacagttcatcctggacgactacatc
aacagaggcatgggctcattgtgccgggtcgtgtgcacacagcctcgtcgcatcagtgcc
atctctgtagcagagcgtgtagcagcggagcgagcagaaagtgttggcaatggaaattct
tgtggttaccagatccgcctacagagccggttaccacggaaacaaggttcagtcttgtac
tgtacaacgggtattattcttcagtggcttcgctcagacccactcttgtccagtattagt
cacttggtgttagatgagattcatgagaggaacctgcagtcagacgtgttgctcatcatc
gtgaaggatctgctgaagctccgggatgatctcaagatcatcctcatgagtgccacgctc
aatgcagagaagttttccaaatactttgacaactgtccaatgatccacatccccggctca
actttccctgtggacgagttcctactcgaggacattgtagagatgactagatatcgccct
cagaatcaggaccgtcgaccgtcatggaagagaggcttttggcagggacagaactccaga
ccagagaaagaagagaaagaggccgagtacaaagacaagtggcctttatatgagcatgct
ctgcgcggaaggtattctgacaacacgattacgacactgcagatgttggacaataatgac
aagattgacctggagctgatcctggcactgatccgttacattgtgcttcatgagcaggaa
ggagccatcctggtgtttctccctggctgggacaacatcagcagcctcaatgaccttctc
atggctcagcagatgttcaaatcagagcgcttcattatcatccctttacactctctaatg
cccactgttaaccagacgcaggtgtttaaacgacctcctcctggagttacaaagattgtg
attgctactaatatagcggagaccagcatcaccatcgatgacgttgtgtatgtaatagat
ggaggaaagattaaagagaccaactttgacactaacaacaacatcagcaccatgaccgct
gagtgggtcagtgtggccaacgccaagcagaggaaaggacgtgctggcagagtgcgtcca
gggaagtgctatcatctgtacaacggcctcagggcagagctgttggacgactatcaacta
cctgaaatcatgaggacgccactggaggagctgtgcctgcagatcaagattctgaagctt
gggtccatagctcgattcctggagaaagctccggaccctccgactgaaaatgccattaac
ctcgccatcaagaacctcatggacctgaacgctctggaccggtcagagaacctgacggct
ctgggtttccacctggctcgtcttcctgtggagcctcacattggcaaactgattctgttt
ggagctttgttgggctgcctcgaccctgttctcaccatcgctgcgtcactcagcttcaaa
gaccctttcttcattccactgggtaaagagaagatggcggacatgaggaggaagactctg
tccagaaactcaaagagtgaccacctcaccattgtcaatgccttccagggctgggaagaa
accaaacagcgtggcgtcagatatgagagagaatactgctgggataactttctgtctgcc
aatactcttcagatgctgcacaacatgaaggctcagtttgctgaacatctaatgcatgta
ggttttgtcagcagcaagaaccccaaagaccccaaatctaacatcaactcagacaatgag
aagttaatcaaagcagtgattgtagcaggtctgtatccaaaggtggccatgatcagaccg
tcccacagcagaaagaggccgggagttaaagtttacacccaggctgatggaaaagtctgt
atccacccgaaatccgtcaacgctgaagagacggacttcaactacacgtggctcatttac
cacctgaagatgaaaactagcagtatcttcctctatgactgcactgaagtgtccccgttc
tcgctgctgttttttggaggagacatcagcatccagagagatgaggaccaggacaccata
gcagtggacaagtggattgtcttcagatccccagcacgcatcgctcaccttgtgaagagc
ttaaagaaagagttggattctctgttggaggagaaaatccgtaatccttcacctgtcgac
tggaataaccgtcagtccaaagactgtgccgtcatcacagccatcatagacctcatcacc
acccaggagaagagcacttctgccccgagagggcaacaccttcacttcactgatgacaat
gactag
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integrated database retrieval system
