Solea senegalensis (Senegalese sole): 122773978
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Entry
122773978 CDS
T07721
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122773978 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122773978 (robo1)
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
ROBO family
122773978 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_5
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
122773978
NCBI-ProteinID:
XP_043888943
LinkDB
All DBs
Position
LG8:complement(4535557..4788862)
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AA seq
1711 aa
AA seq
DB search
MQASRAGMAGGRMPLLVVVVLVEVLSGACAPGNGSGKYRGSWRWKGDRGQIGVAQDRGAS
DDTTAAPTAEHEDDNTLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP
TVEWYKDGERVETDRDDSRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAV
SHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWRKDGVNIDDRDER
ITIRGGKLMITNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPSSQVVLVQQ
SVEFGCEARGDPVPTVRWRKDDGDLPKGRFEIREDHTLKIHRLISADVGSYTCVAENLVG
KAEASATLTVHVVSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLF
SYQPPQPSSRFSVSQSGDLTITDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPP
PVIRQGPSNQTVAVDGTVVLSCMASSNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRY
AKLGDTGTYTCIASTPSGEASWKAYLEVQEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTR
TSVTLSWKPNLNSGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLV
RAANAYGLSDPSPISDAVKTQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQ
WTVEQQSQYMQGYKVMYRPSQEGSQRNDWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPF
FNEFQGTDSDVKIGKTLEEAPSAPPREVTVTESGDNGTAIVVSWQPPPEEEQNGVVQEYK
IWCLGNESRYHVNRTVDGTTLSVLIPSLTPGIRYSVEVAASTIVGPGVKSDITFFQLDAS
GRMTETVASENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHKKKRNGLSSSYA
GIRKVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSIN
CCTAGNGNSDSNLATYSRPADCIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTF
NSPNLKDGRFVGPGGQPTPYATTQLIQSSIMGNNINADRGTGGSGGGPGGGGELNEKHCW
KPSSIQQQKQEMGSQLQYIIMEQNKLNKDRCRGGDNPMPATIPYNQTHDSHTGGSYNSSD
RGSSSTSGSQGHKKGMRTPKLPKQSTMNWADLLPPPPANPPPSRTVEEYTHSMEESCDPD
TQSSMPPSYMYLQPDELEEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQ
PMLQDGPDSHERRRHVVSPPPPPRPHSPSHTYGYITSPLALDTDGMEEEDILEEEEEGDE
TDTEVAKMHYHHTHPHTHPHHAQMHPRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPHTQGHEVGGASARK
YQINPAGHRPGSPVSTDSNMSMAAVHRRPPKKQKQHPAGHPGVQRRDPYNEDLPPPPIPP
PAVLKSPTHPSKATLEGRGVISPKAGEVRDRRGGTGGYKPRDGSDHRTSSSERKDAQERQ
KPGEKGNRHEGSTANKARSQHAGSEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRR
GEGGRRNLADMGHITTGALQPGDEELEMVES
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttcacgggcaggcatggccggcgggcggatgcccctgctggtggtcgtggtg
ctggtggaggtgctgagtggagcttgtgcgccggggaacggctcggggaagtacagggga
agctggaggtggaaaggtgacagaggccagatcggagtcgctcaggaccgcggggccagc
gacgacacaacggcggctcccaccgccgaacatgaggacgacaacaccttgggctacaca
ggatcccgtctgcgccaggaggacaccccgccccggattgtggagcacccctctgacctg
attgtatccaaaggggagccggccaccctcaactgtaaagcagagggacggccaaccccg
acagtggagtggtacaaggacggcgagcgcgtggagacggacagagacgactcgcgctct
caccgcatgctgctgcccagcggctcgcttttcttcttacgcattgtccacggacgccgg
agcaaaccggacgagggctcctacgtctgcgtcgcccgcaactacctgggcgaggccgtg
agccacaacgcctcgctggaagtagccattcttcgtgacgacttcagacaaaaccctgca
gatgtgatcgtggccgcaggagaacccgccgtcctggagtgtcagcctccgcgcggacac
cccgagcccaccatatcgtggagaaaagacggcgtgaacatcgacgaccgagacgagagg
atcactatacgtggagggaagctgatgatcacaaacgctcggaaaagtgatgcggggaag
tacgtgtgtgtcggcacaaacatggtcggagaacgagagagcgaaatcgccgagcttaca
gtgctggaacgtcccagttttgtgcgtcgcccaagcagccaagtggtgttggtgcaacag
agtgtggagttcggatgtgaggctcgcggtgatccggttcccacagtacgctggaggaaa
gacgacggtgacctgcccaaaggaagattcgagatccgcgaggaccacaccctgaagatc
caccgtctgatctcggccgacgtcggctcctacacctgcgtggcggagaacttggtgggc
aaggcggaggcgtcggccacgctcaccgtccacgtcgtgtctgtgcccccggcgtttgtg
gtgagaccgaggaaccaggtggttggagttggcagaactgtcactttccaatgcgaggcc
actggaaacccacagccagccattttctggcagcgggaaggcagtcagaacctgctcttc
tcctatcagccccctcaaccgtccagccgattttctgtgtctcagtcgggggacctgact
atcactgatgctgaacgctcagacatgggatactacagctgccaggccctgaacatcgcc
ggcagtgtcatcaccaaggctctgcttgaggtcactgatgttgtgtcggaccgcccgccg
ccggttatccgacaaggtccgtccaatcagaccgtggctgtggacggcacagtggtcctc
agctgcatggcatcgagtaaccccaccccgaccatcctgtggagaaaggacggcgtactg
gtgtccacacacgactccagggtcaaacagctggacacgggcgcactacagatacgctat
gcaaagctgggcgacactggaacctacacttgcatcgcctccacgcccagtggagaggcc
tcatggaaagcctatttagaggttcaagagtttggagtccctgtccaaccaaacagacct
acagatccaaacctgatcccaagtgctccttcaaaacctgaggtcactgacgttacccgc
acctccgtcaccctttcctggaagcctaaccttaattctggagccacacccacctcctat
ataattgaggccttcagtcatgcatcagggagcagctggcagaccttggcagaacatgtg
aaaactgagtcatttgtactgaagggcttgaaacccagcgcagtctacctcttcttagta
cgggcagccaatgcctatgggctgagtgatcccagtcccatctctgatgctgtgaaaaca
caagatatccctcccaccagtcagggtgtggaccaccgtcagatccaaagggagttggga
gaagtggtgatccacctgcacaaccccaccatcctctcctcctcctctgtgcgggtgcag
tggacagtggagcagcagtcacagtacatgcagggctacaaggtgatgtacaggccttca
caggaggggtcgcagcggaacgactgggccgtgttcgaggtgcgaacccccggggaggac
agcgccgtcgtgccgcagcttcggaaaggagtaacatacgaattcaaagtccgccccttc
ttcaatgaattccagggaaccgacagcgatgtcaaaattggcaagacgctggaggaagcc
cccagtgccccgcctcgcgaggttacggtgacggagagtggggacaatgggactgcgatc
gtggtctcctggcaaccccctccagaagaggaacagaatggggtggtccaggaatacaag
atctggtgtttggggaacgagagcaggtaccacgtcaaccgcaccgtcgacggcacaacc
ttatccgtgctgatccccagtctgaccccggggatccgatacagcgtggaggtggcagca
agcaccatagtgggacctggcgttaagagcgacatcaccttcttccagctcgatgcctct
ggacgcatgacggagacggtggcctcagagaaccctctgtcccagcagatctcggacgtg
gtgaagcagccggccttcatcgcggggataggagcggcgtgctggatcatcctcatggtc
ttcagtatctggttgtacagacacaaaaagaagaggaacggcctctccagcagctatgcg
ggcatacgcaaagtgccgtcctttactttcacaccgacagtggcatatcagagaggtgga
gagggtgtgtccagtgctggcaggcctggcttgttgaacatcggggagtctgcgactcag
ccctggctggctgacacgtggcccaactcctgctccaaccacaacgactgcagcatcaac
tgctgcaccgctggcaacggcaacagcgacagtaacttggcaacgtacagccgaccagcc
gactgcatcgccaattataacaaccagatggaaaacaagcagaccaatctcatggtgcca
gagtcgggagtgtacggcgacgtagacctgtccaacaagatcaatgagatgaagaccttc
aacagccccaatctgaaagacggacgcttcgtgggtccggggggccagcccacgccgtac
gccaccacgcagctcatccagtcttccatcatgggcaacaatataaacgcagacagaggg
actggaggtagcggaggtggccccgggggtggaggggagttgaatgagaaacactgctgg
aagccgtcttccatccagcagcagaaacaggaaatgggctcccagctgcagtacatcatc
atggaacaaaacaagctgaacaaggatcgctgcagaggaggcgacaatcctatgccagcc
accatcccctacaaccagacccacgacagccacactggaggctcctacaacagttcggat
cgaggcagcagcagcacgtccgggagtcagggccataagaagggaatgcgcacccccaaa
ctacccaaacagagcacaatgaactgggctgacctgctgccccctccccctgcaaaccca
cccccaagtcggaccgtagaggagtatactcattcaatggaagaaagctgtgacccagac
acgcagtcctccatgcccccctcgtacatgtacctgcagcctgatgagctggaggaggaa
gaggagatggagagggggcccactcctcccgtccggggagcggcgtcctcacccgctgct
gtatcttacagtcaccagtccacagccactctcacgccctcgccccaagaagagatgcag
cccatgctccaggatggacctgacagccatgaacgcaggcgccatgttgtgagcccccct
ccccctcccagaccccactctccctcacacacatatgggtacatcaccagcccactggcc
ttggacactgacggcatggaggaggaggacatactcgaggaggaagaggagggcgacgag
acggataccgaggtggccaagatgcactaccaccacacccacccccacacacacccccac
cacgcccagatgcatccccggaggttgctgctacgagggctcgagcagacgcccgcgtcc
agcgtgggcgacctggagagttcggtgacgggctccatgatcaacgggtggggctcggct
tctgaagaggataatgtctcttcagggaggtccagcgcggtcagctcttcggacggatcc
ttcttcaccgacgccgactttgctcaggcggtcgccgcagctgcagagtattcaggcctc
cgagtggccaagtacccccacacgcagggccatgaagtcggaggagcttcagcaagaaaa
taccaaataaacccagcaggccaccggcctggaagtccggtgtctacagatagtaacatg
agtatggcagccgtacataggaggcctcctaaaaagcagaaacagcatcctgcaggtcat
ccaggcgtccagcggcgtgatccgtataatgaagatctccctcctccacccatcccacct
ccagcggtgctcaagtctccgacgcatccctccaaggcaacactggagggccgaggagtg
atttcccccaaagcaggcgaggtgcgggacaggaggggaggaacgggaggctacaagccc
cgagacggctcggaccacaggaccagctcatctgaacgcaaagacgctcaggagagacaa
aagcctggagagaaagggaatagacatgagggtagcactgccaacaaggcacgcagccag
catgcaggttcagaagatattctgccctacagccgaccacagttccccacagtcaacagc
ccccgggatccaagctcctccagctccatgtcttctcggggttcagggggccggcggaga
ggagaaggaggccgccggaaccttgcagacatgggccacatcaccacgggggccttacaa
ccaggagatgaagagctagagatggtagaaagctga
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integrated database retrieval system
