Solea senegalensis (Senegalese sole): 122773981
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Entry
122773981 CDS
T07721
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122773981 (npas1)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122773981 (npas1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
122773981
NCBI-ProteinID:
XP_043888955
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All DBs
Position
LG8:complement(14106770..14143189)
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AA seq
809 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFVSQGDPPWSPLMEGDSNCSKVRRSSHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHVAPESASSSASASSLAGTPEPAPSSPHTPADECPDRGYF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALMPGSGRSVRRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNFVLSRTELPDTPL
DLLQLPEGVRAERLRVSSSPTVTSPQTRGSQSVKGSARKGEPDTKGREKFTPAAIQSEDR
RKRLLRSEPEGAPPETRRRLEDLRHTEESVSASSDLASDSEGEEEEDTQWDQGGEDGDRL
KQEDGAGGGKQNRGEDNPTRGERGGRGYNGRAVIQQLKSAVTLSPLSGSPNIKTEHDSLT
TGGRWGSHTQTSTTQHQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPALS
PAMSVSSPLPREERAVSGVVSRGSGGAGAGCGPDFELLQRLAAGGAAGRVLFHPLALGPQ
GPQSLYAPSTIRYAPPELPPSHHHGAGHGDGLQLRSDHHKGPPPAFFPHLQRLAGLPPFS
GFSPSDSPFSSSLPFCMNGLRGAAGSEED
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgccgttcgttagcgaagggaagtgcgtgagtgtggagtgggactttctg
caaggactgctggccaagcctcccaccctaccctgtctgcaaaaccttcgtaaagagaag
tctcgcaatgcggctcgttcacgcagagggaaggagaattttgagttctttgagctggcg
aagatgttgccactacctggggccatcaccagccagctggataaagcctcagtcatccgg
ctcaccatcagctacctgcacatgcgcacctttgtcagccagggggacccgccctggagc
cccctgatggagggcgacagcaactgcagcaaagtaagacgatcatctcattcgctagct
actgacatatttgagcagcacctcggggctcacctcctgcagtctctggatggctttgtg
tttgtggtcagtcaggagggacgcttcctctacatctcagagacagtttctatctacttg
ggactctcacaggtggagctgaccggcagcagtgtgtttgactacatccacccggcagac
cacgttgagatggcagagcgacttggaatcaggccgcatctgagggccgaggccggctgc
cacgtggctccagagagcgcttccagctccgcgtccgcctcgtccctggctggtactcct
gagccagctccatctagtccccacactcctgccgacgaatgtcctgatcgtggctacttc
atccgcatgaaatccacactcaccaaaagaggcctgcatgtcaagtcttctggatacaag
gtaattcatgtgacgggaagaatccgctgccgccccgcactcatgccgggctcagggcgc
tcagtgcgtcgacctatgggtttggttgccctggcgcacacactcccgccctccacactt
aatgaagtccgcatggagagccacatgtttgtcttccgagtgaacatggacctgcaggtc
acgtattgtgagaacaggatctcagagtatatggatctgaccccagcagaggtggtggga
catacctgttaccacttcatccacgtagaagacttggaaaaccttcggcaaagccacgag
gacttgctgaggaaaggccaggtagtgacgggttactatcgttggctgcagaggagagga
ggctacctgtggatccagtccacagccaccgtctccatcaaccacaaagccccgcacgaa
cgcaacgtcatctgggtcaactttgtcctcagtcgaacggagttgcccgacactccgctg
gatctgctgcagctaccggagggtgtaagagcagagagacttcgggttagctcctctccc
accgtcacctccccacagacacgaggttcccagtcagtgaaaggctcagccaggaagggt
gaacctgacactaagggcagagagaaattcactcccgccgccattcagtcagaagaccgg
aggaagcgccttctgaggtccgagcccgagggcgctccccccgaaacccgccgcagactg
gaggacctgcgtcacactgaggagagcgtgtccgcctcctcagacttggcaagtgacagt
gagggggaggaggaggaagatacacagtgggaccaggggggagaagacggtgacagactc
aaacaggaagacggcgcaggaggaggtaaacagaacagaggagaagacaacccgactaga
ggagagagaggaggcagggggtacaacggccgcgctgtgatacagcagctaaagagtgca
gtgaccctgtctcctctgtccggcagccccaacatcaagactgaacatgactccctgacc
accgggggccgctggggttcacacacacaaacctccactacccagcaccaaccgtcacat
gcacacacaccctccagcagtctcaatggcgacagccccaccactccgatccctgactcc
tcctccagcagtgaagcccctcctaaaggtttgttcactcccccgtcccctgccttgtcc
cccgccatgtccgtgtcctccccgctgccccgcgaggagagggcagtgtcaggcgtggtg
agtcgtggcagcggcggcgcgggggcaggttgcggccctgactttgagctgctccagaga
ctggctgcaggcggcgctgcgggtcgggtcctctttcacccccttgccctcggcccacag
ggccctcagagcctttacgccccaagcactatccgctatgctccacctgagctgcctccg
tcacaccaccacggcgcaggacacggtgatggcctgcagctacgctcagaccaccacaag
ggacccccgcccgccttctttccccacctacagcggctggccggcctgccacctttcagt
ggtttctcgccgtctgacagtccgttctcctccagcctgcccttctgtatgaatggactg
aggggggctgcgggctctgaggaggactga
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