Solea senegalensis (Senegalese sole): 122774163
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Entry
122774163 CDS
T07721
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122774163 (irx1a)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122774163 (irx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122774163
NCBI-ProteinID:
XP_043889156
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Position
LG9:15359633..15364157
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AA seq
496 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSDRPGVLSPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEG
GREHRGGVGAGVDLDSLEKRRAFALQAHEAFDKSKSTVPVHPGSKENSDGNNNNTTRVFS
PDRSGTFPLPSNNKPKIWSLAETATTPDSSSQKPTSPGGPAATTHPSAPQHQLQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHQHHHLQQQQQQQQQQPTSVV
VSPVAAAAALSNDSKAHAESHSPKHIDHENGARSVSPPSQTLKSSFRPIHDRSSLPSSTR
SPQDATQRVLTALSSA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctcggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgacagaccgggagtgctttcgccttcgtcccgtggagggagcaccgaaatcggggga
agtccttccgccaccgcggcggcggtcacgtcagtgttgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccttacacaagcgcggatttggctcttttctcacaa
atgggatcccagtatgatctgaaggacagtcccggcgtccaccctgccagctttgcagca
cacacctccccggccttctatccatatggtcagtttcagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaagcctggctcaacgagcacaggaag
aacccgtacccaaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctg
acgcaggtttccacctggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctgggggagcaggagcaaagaggacggggaggacggcaacttgttcggcagcggagat
gaagcggagaagaatgaagacgaggaggagattgatttggagagcatagacatagacaaa
atcgacgacaacgacggggatcagagcaacgaggacgatgacgataaatcgacagagggg
ggcagggaacacagaggcggtgtgggtgcaggtgtagacttggacagtttggagaaaaga
cgggccttcgccctgcaggcccacgaggcctttgataaatcaaagagcacagttccagtt
cacccagggagtaaagagaactctgacggcaacaacaacaacacaacaagagttttttcc
ccggacagatccgggacttttcctctcccgtcgaacaacaagcctaagatatggtcttta
gcagagaccgcgacgactcctgatagttcctctcagaaacccacgtcccccggtggccca
gcagccaccacgcatccatcagccccacagcaccagctccaaacccacccggccttcctg
cccagtcacggactgtacacttgtcagattgggaagttccacaactggacgaacggggct
tttctaggccagaactccctgctcaatgtgaggtcgtttctcggggtgaaccagcaccat
cagcaccaccacttgcaacagcagcagcagcagcagcagcaacagccgacgtcagtggtg
gtgtctccggtagcagctgcagcagcactcagcaatgacagcaaggcccatgcagagagc
cacagtcccaaacatatagaccatgaaaacggtgcaaggtctgtttcgcctccatcacag
accctgaagtcctcctttcgacccatccacgacagatcatctctgccttccagcaccagg
agtccacaagacgccacgcaacgggtcctcactgctctctcctcggcttga
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