Solea senegalensis (Senegalese sole): 122774335
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Entry
122774335 CDS
T07721
Symbol
tnxba
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04510
Focal adhesion
ssen04512
ECM-receptor interaction
ssen04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122774335 (tnxba)
04518 Integrin signaling
122774335 (tnxba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122774335 (tnxba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssen00536
]
122774335 (tnxba)
Glycosaminoglycan binding proteins [BR:
ssen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122774335 (tnxba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Fn3_Dep-1_3rd
EGF_Teneurin
Fn3_Dep-1_2nd
FN3_DSCAM-DSCAML_C
EGF_TEN
Pur_ac_phosph_N
EGF_2
Cpn10
EGF_Tenascin
TusA
Motif
Other DBs
NCBI-GeneID:
122774335
NCBI-ProteinID:
XP_043889420
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All DBs
Position
LG9:complement(16577570..16583361)
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AA seq
961 aa
AA seq
DB search
MTHKISLMPGGCDGRCETELAALIGRVARLEKEMSQLKDNCPCSANCPNDCSGNGECEKG
KCICHQGFVGPNCSKCAQGIECNKKTTKGKAKETVEAVTLQKMDQKKETEAKESDGKLKV
TTIAKLAPVRTQAQQEVSVKKITTKGSPSVTKTSRPTVAQVLLKHEGRKQEEARKGKIVL
ASKKVLQKTDLKIVKVGTASKMYRKPDQLKDEPQTNVTQAKVNKFNVTAKIVTILSKSMG
TNKTRAGKETLEQSTLADKNATQSSGPKQIKIIKLENTNVQSSVNRNNEAAMEKVTQRSQ
YVVNATIAATTDEARALLNKTGIHGPGMSRRVGGSGLGSVKIVNISSSSFTLTWLAPQRM
FKNFSVIRREPRTEGDEDDHEDFEEEPLGLDKASVAKNPAEVQVQTDSPEIAISSGKITG
SRGKTETKRISMVVPGNVRLVEFSNLRANTRYSLYIYGTSAERQSKMHRVVAVTGPEPAT
KMVFSNVTESSVTVAWTKPKTTFTGFRVTYTNIITGESRFVVMDYQQSYIVLSKLSAGSS
YIISINTTQGRGQSDALMSIITTVPAPPTHLQVANVTDTKAVLQWTPSLGKVDRFIISYE
SSKTPNVTVTVMLSGNSVEHQLKGLQRGTLYRVKVLSQKDSLQSMAISTTFTTANVVKAS
EVGARSAVITWKNVAVVYHSYRVIYQMAGGETREVILDSTVTEYKLTGLLSMSRYKVLVQ
GERDGHYTSLVTTEFITGKLRFPFPTECSQELLNGALQSGEVDIYPQGKEGQAVRVYCDM
ETDGGGWTVFQRRMNGKTDFYRTWNEYRAGFGNLSEEFWLGNELLHNLTSIGPVSLRVDM
KSGNETAYAQYSNFSIDSEGRHYSLTVSGYSGIAGDSMRYHNGRPFSTWDKDADPLGIHC
ARAYMGGWWYKNCYKTNLNGLHGINSNNQGVVWIDWKGKDSSIPFTEMKFRPSRFSPATH
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataagataagcttgatgcctggtgggtgcgatgggcgatgtgaaactgagttg
gctgcactgattggacgagtggcccgactggaaaaagagatgtcccagctgaaagataat
tgtccatgttctgcaaattgtccaaatgactgtagcggaaatggggaatgtgagaagggt
aaatgtatctgtcatcaggggttcgtgggtccaaactgcagtaagtgtgcccaaggaatc
gaatgtaacaaaaaaactaccaaaggtaaagccaaggaaacagttgaggcagtgacccta
cagaaaatggaccagaagaaagaaactgaagctaaagagtctgacggcaaactgaaagtg
accactattgctaaactagctcctgttagaacacaagcacaacaagaagtttctgtcaag
aaaataacaacaaaaggttccccaagtgttaccaagaccagtcgcccaacggttgctcaa
gttctcctgaaacatgagggaagaaagcaagaagaggcccgcaaaggcaaaatagtcctg
gcctctaaaaaggttctccaaaaaactgacctcaaaattgttaaggtaggaactgccagt
aaaatgtaccgtaaacctgaccaacttaaagatgagcctcaaaccaatgtaactcaggcc
aaggtcaataaatttaatgtcacagctaaaattgtgaccattttgtccaagagcatggga
acaaacaaaaccagagcagggaaggagaccctggaacagtccacactggctgataagaat
gcaactcagtcatctggacctaaacaaatcaagataattaaattagagaatacaaatgtg
caatctagtgtcaacagaaacaatgaagctgcaatggagaaagttacacagaggagtcag
tatgtagtgaatgcaaccattgctgcaacgacagatgaggcccgagctctgctaaacaaa
acaggtattcatggccctgggatgagcaggagggtaggtggatctggattagggtctgtg
aagattgtgaacatctcttcctccagttttaccctcacatggttagcaccacaaaggatg
ttcaaaaatttctctgtgatcagaagagagcctcgcacagagggcgatgaagatgaccat
gaggactttgaagaggaacctcttggattagacaaggcctctgtagctaagaacccagct
gaggtccaggtacagactgatagcccagaaatagctatttcctctggtaaaattactgga
tcaagaggtaaaactgaaaccaagaggatctccatggtggttcctggcaatgtacgcttg
gtggaattcagtaacctccgggctaacacgcgctattccctgtacatatatggtaccagt
gctgagagacaatcaaagatgcacagagttgttgcagttactggtcctgagccagccaca
aagatggttttcagcaatgtaactgagtcttctgtcactgtggcctggaccaaaccaaag
accacattcacaggcttcagggtcacctataccaacattatcacaggggagagccgtttt
gttgtcatggactatcagcagtcttatatagtcttgtccaagctgtctgctggatcctcc
tacattatttctataaatactacacaaggcagaggccagagtgatgccctcatgtccata
atcaccacagtgcctgcccctccaacacatctacaagttgccaatgtgacagacaccaaa
gctgtgctgcagtggacacccagtctggggaaagtagaccgcttcattatcagctatgag
tcctccaagactcctaatgtgacagtgacagtgatgctgtctggtaactcagtagagcac
cagctgaaaggtctgcaaagaggcaccttgtacagagtcaaagtactgagccagaaggac
agtctccagagcatggccatctcaactacctttaccacagctaatgtggttaaagccagc
gaggtgggcgctcgctctgcagtgataacttggaaaaatgttgccgttgtctatcacagc
tacagagtgatttatcagatggcagggggagagacaagggaagtgatcctggactcaacg
gtcactgagtataagttgacggggctgttgtccatgtcacgctataaagttctggtacaa
ggcgagagagatggacactacacatctcttgtgacaacagaattcatcacaggaaaactt
cgattccctttcccaactgaatgctctcaggagctgctgaatggtgctctgcagtctggg
gaagtggacatttacccacaaggaaaagaaggacaagctgtcagagtctactgtgacatg
gagactgacggaggtggctggacggtgtttcagaggaggatgaatggaaagacagacttc
tacagaacctggaatgaatacagagctggctttggaaacctgagtgaagagttttggctt
ggaaatgaacttcttcacaacctgaccagcatcggccctgtgagtctgagagtggatatg
aaatctggaaatgaaacagcttacgctcagtactccaacttctctattgattcagagggg
aggcactatagtctaacagtgtccggctactcaggcattgcaggtgactctatgaggtat
cataacggacgtccattctcaacctgggacaaagatgctgatcctctggggatccactgt
gccagggcctacatgggaggctggtggtacaagaactgctacaagaccaacctcaatggt
cttcacggcatcaacagcaataatcagggagtagtgtggatagactggaaaggaaaagac
tcctccattccgttcactgagatgaagttccgaccatcccggttctctcctgcaactcat
ggctaa
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