Solea senegalensis (Senegalese sole): 122774346
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Entry
122774346 CDS
T07721
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04621
NOD-like receptor signaling pathway
ssen05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122774346 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122774346 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssen04054
]
122774346 (nod1)
Pattern recognition receptors [BR:
ssen04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122774346 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_16
LRR_8
AAA_22
RsgA_GTPase
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122774346
NCBI-ProteinID:
XP_043889435
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All DBs
Position
LG9:6003615..6015717
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AA seq
939 aa
AA seq
DB search
MDSTQKAKCVHMLTHHRELLVSRLRSIQCILDNLLASGFLCEEDVEIVRRTVTKMDQVRK
ILELVQCKGEEACEYFLFIIYKVCDAYIDLQPWLKEINFNPRSHIAAMKVVNTDPISRYS
EKLRQEMSRDTCFIMSYGQHDETRLEDLYTDTLMELFNDCNESLGFMESLDQLLGDHAVF
NPQGEITYVMGDAGVGKSILLQKLQNLWSKKELQTDAVFLFKFRCRMFSVFKKTEQISLR
DLLFNYNCHPDHDPDNEVFDYILRFPEKVLFTFDGYDEIHEDLDLLNVPEVVSPEHKAHP
LQLLVSLLCGKLLKGSQKVLTTRTGIEIQSRVIRKKVALRGFSPTHLKTYINLHFQEQEH
RELVSVQLDASPHLCGLCSTPLFSWIVFKSFKHLHTIHDSFHLPDTCVTLTDIFLLLSEV
FLSHSTSTASSQLKKSTRCASQTFKSRLRPLAAFAKLALQGMEGGTFICDQEEITACGLR
EEDLSLGFLRPVSEYDARGSSANFEFLHITLQSFLAAFALVLDEQAPANSIRKFFTECSR
QREPSCLLFDSCINNSSKHSEKNPFVTNEHLQFTNLFLCGLLSKAHNDLMGHLVSPVLLK
KKRALLKSYLSTSVKSHLHGLPHYASEGGNKVHVLPNFLWMLRCIFETGSQDIAQMTAKS
ITANLIKLGHCNVYSGDCTAINFVLQHHQKLLGVDMDNNNISDYGVKQLKPSFCKMTVVR
LCVNHLSDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIVEECPKLRVLKIGKN
NITSVGGKYLASAIQKSNSIFDVGMWGNSIGDEGAEAFAKALRHHPNLTNLSLSANGITS
TGGKFLAEALKENSVLRIFWLVQNELADDAAPHLAELVEANTGLSHLWLINNKFTAHGLK
HLAEALTHNTALKEICVKGNQLSAEEENQFEAEKRLRFH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggattcgacgcaaaaggccaaatgcgtgcacatgctcacccaccacagagagctgctg
gtgtccaggctgaggagcattcagtgcatcctggacaacctgctggccagcggcttcctc
tgtgaagaggacgtagagatcgtacggcggactgtcaccaagatggatcaggtgcgcaaa
atcttggagcttgtccagtgcaaaggggaggaggcctgtgaatactttctctttatcata
tacaaagtatgtgatgcatacatagacctccagccatggctgaaagagataaacttcaac
ccaaggagtcacatagcagcgatgaaagtggtgaacacggatcccatcagcagatatagt
gagaagctgaggcaggaaatgagccgggacacctgtttcatcatgtcttatggacagcat
gacgagactcgtctggaggatctttacaccgacaccctgatggagctgttcaatgactgc
aatgaaagtctgggcttcatggagagcctggaccagctcctgggagaccacgcagtcttc
aatccccaaggtgaaatcacctatgtgatgggggacgccggtgtgggaaaatccatcctc
ctgcaaaagctccagaacctctggtccaagaaagagctgcagacggacgctgtcttttta
tttaagttccgctgtaggatgttcagtgttttcaagaagactgaacagatttccctcaga
gaccttctgttcaattacaactgccacccggatcatgatccagacaatgaggtgtttgat
tacatcctacgcttccctgaaaaggttctttttacattcgatggttatgatgagattcat
gaggatctagacctgttgaatgtgccggaagttgtgtcgccagaacacaaggcccaccct
ctccagctgcttgtgagcttgctctgtggaaaactactgaagggctcccagaaggttctg
acaactcggacggggatcgagatccagagcagagtgatccgaaagaaggtggctctgcga
gggttctcgccaactcatctgaagacctacattaacttgcactttcaggagcaggagcac
agagagctggtgtcagtccagttggatgctagcccccacctctgcggcctttgctccacc
cctctcttcagctggattgttttcaagagcttcaagcacctgcacacaatacatgatagt
tttcatctgcccgatacatgcgtcacgctcactgacatcttcctcctgctctccgaggtg
tttctcagccactcaacttcaaccgcttcgtctcagctgaagaaaagcacccgctgtgcc
tcacagacgttcaaatcgaggctcaggcctctcgctgcttttgccaaactggcactacag
ggtatggagggcggcaccttcatttgtgaccaggaggaaatcaccgcatgtggtctcaga
gaggaggacctgtcgctgggctttctcagacctgtcagcgagtatgacgccagaggaagc
tctgcaaactttgaattcctccacattaccctgcagtctttcttggcggcgtttgctctt
gtgttggatgagcaggctccagctaactccattcggaagttcttcacagagtgcagcagg
cagagggaaccctcctgcctgctctttgactcgtgtatcaataactcctcaaagcacagt
gaaaagaacccatttgtgaccaatgagcaccttcagttcactaatctcttcctgtgcggg
ctgctgtccaaggctcacaatgacctcatggggcatctggtttcccctgtgttactcaag
aaaaaacgggccttgctgaaatcctacctgtccactagtgttaagtcccacttgcatggc
ttaccccactacgccagcgaaggaggcaacaaagtccacgttctgccaaactttctgtgg
atgctgaggtgcatctttgagaccgggagccaagacatcgctcagatgacggcgaaaagc
atcacagcgaacttaatcaagctgggtcactgcaatgtgtactcgggggactgcaccgcc
attaactttgtcctgcaacaccatcagaaactcctgggtgtcgacatggacaacaacaac
atcagcgattatggcgtgaagcagctgaagccttcgttctgtaagatgacagtcgtgaga
ttgtgcgtcaatcacctgtcagacagtagcatcgaggtgctcgcggaggagctgtgtaaa
cacaaagtggtggaggtcttgggactttacaacaaccacatcacagatgttggcgcaaag
ctcgtcgctcagatagttgaagagtgtccaaagttgcgggttctcaagattggtaagaac
aacatcactagtgttggtgggaagtatctggccagtgcaattcagaagagcaactctata
tttgatgtgggaatgtgggggaacagcatcggtgacgagggagcagaagcattcgcgaag
gctttgcggcaccaccccaatctcaccaacctcagcctgtcggccaatggcatcacatcg
acgggagggaagtttctggcagaggctctgaaagagaacagcgtcctcaggatattctgg
ttggtgcagaatgagttggcggatgacgcggccccacacttggctgagctggtcgaagcg
aacacaggtttaagtcacctctggttaatcaacaacaagttcactgcgcacgggctcaaa
cacctcgccgaggccttgactcacaacacagcactcaaagagatatgtgtgaaaggaaac
cagctctctgcagaggaagagaatcagtttgaggcagagaaaaggctgcgcttccactga
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integrated database retrieval system
