Solea senegalensis (Senegalese sole): 122774425
Help
Entry
122774425 CDS
T07721
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122774425 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122774425 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122774425 (ranbp2)
03110 Chaperones and folding catalysts [BR:
ssen03110
]
122774425 (ranbp2)
04121 Ubiquitin system [BR:
ssen04121
]
122774425 (ranbp2)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122774425 (ranbp2)
Chaperones and folding catalysts [BR:
ssen03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122774425 (ranbp2)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122774425 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
TPR_16
TPR_14
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_8
TPR_7
ARM_TT21_C
ANC1_spectrin
Oxysterol_BP
Motif
Other DBs
NCBI-GeneID:
122774425
NCBI-ProteinID:
XP_043889626
LinkDB
All DBs
Position
LG9:complement(9760425..9784613)
Genome browser
AA seq
3033 aa
AA seq
DB search
MRRSKAEVDRYVSSIQSSSPSLKEKPVKGFIFAKLYFEAKEYELAKRHVSEYLKVQQRDP
KAHKFLGQLYEREGDINKAVGCYKRSVDLNPAQRDLVLKVAELLVNTEECDGRAEFWVEK
AAKLLPGNIAVFNLKERLLSRQGQQGWNRLFDLLQAELAVRPGDAHVNVKLVQLFCQDGR
LDEAVKHCLAAEKRGMLSRSLDWYTVVVRTLKEYLALPSIASNEKMCRRLQGELLLAHCN
LLRISLSESRVQSSLDALKGFDQAMHLLSSVAGRYTDDLCEVYVEMRGHLYLHAATLLLK
LAQDRQQSWRDVADFAVLCYLLAYQVPRPKPKIKRDQSAPQLLELLANDRQSQAGHMLLN
LSMDSSTSIGEVVEAFGNCSGRDSLSELLFGPQASTGSSFIANDDIRSINTSVPELSQLA
KYDTGSIQLHGGDLQHLSWLGLQWTFRAQRPALRDWLGQLFPRLPLETSKLDTDAPESIC
LLDLEVFLLGVVFCSHCQLQETAKISSGMNQQQQQQQQLYEPRCLPLPLLRLLTTDRQRE
WWDASYSLIHNRAAPNMSAKLRMVIQHGLKTLRAGEKHGLQPALAIHWAQSLNQTGDGVN
SYYDQKEYIGRSVHYWKVVLPLLEKIKNRRSIPEPLDPLFIHFSSKDIRITSVKTYEEEF
NIAYAALLDIEGRTEEAIATLETINNMSSIWHLAQIYQRLSEEASNGVEETQDRCITYLR
KFRTYLSKIYNANADDFEKLPVSMEEVLDLLNDVNQQLGENGEAMDEEEEGQRGPVHSSP
AHPTETNATISHSHIKFSTPSPNKSIISPSKRLISPKTPPQWVDDQKSLLQMLCQQVEAL
KNEVHDLRHNASGNAGSPHHKMYGESYGAEGLQESFTPVQSYHGAPLTVATTGPSVFYNQ
SPAYNSQYLLRTAANVTPTKGPMYGMNRMPPQQHMYAYQQPTHTPPLQTAPPCIYPPQEQ
VFGAPLRFESPATSLLSPYSEEYYGQSVTQQTINPPLPEPGYFTKPSVVPSQTPKSAEGK
PMDFGKVSFSQQAPAEVPKVPSFGAGAVAQSTPSAGFKFNSNFKSNDGDFTFPPSQAKNR
ETLLGLLTSDIPTKQETVVEKSPAQEQPISQSGVFTFGTKSVPSFSFVDTTQSTGTGSLF
GKVNQPFKFGDVAMPVFGLSSGVAEAEKAAESDNDSTRGEDEEDGPHFEPIVPLPDKVDV
KTGEEEEEEMFCNRAKLYRFDTESKEWKERGIGNVKILKHSTKGKVRLLMRREQILKICA
NHYITTDMLLKPNAGSDKSWVWKAIDYADEEPKPEQLAIRFKTVDEASLFKAKFEEAQRI
VVKSPEKTVQKEKGEGSLKDSKSLAAQFAIKEGEWDCDVCCIRNKPTDMKCVACQSSNPN
ATSKPDVNAAGDSKASTFDFKFGTDSSQPSSSVSTFTGFGAFGAFGDSKTSFTFGTGASK
PADIVTSSFCSNFGAQFAKKPGQWECESCSVRNEATADCCISCKALKSPAITTVTAQTTP
AAEPPVVQSSSSASDYGFGAQFSKKPGQWDCDVCEVRNEISADKCVACSSPNPTSKLKVG
APISSNLPAVSGFGSDFSKKDGEWDCDCCLVRNDASAAKCVSCQAPHEKPSLEAMFAKKG
GEWDCDTCLVRNNGFASKCLSCQSPNPTAKSTTSTAPSASTFNFSFGTKTLTSQPTGTGF
TIPSESGNTFQFGQNKDKSSAASFKFEASQSGSTTSSSGFSFSMPIPTGGFKFGIQDTAK
EPPSTDDPAPPSGSASSFLKSIADKHNEKQNISTPEVDPAEQDQNPLISGKPNTFSFADL
AMSSGGDFQFCQKDPNFKGFAGAGEQVLSSFQATPTKTDASNELEDDDMYKTEENDDIQF
EPVVQMPDKVDLVTGEEDEQVLYSQRVKLFRFDPTTGQWKERGVGNLKFLKNNANGRLRV
LMRREQVLKVCANHWITTTMNLKPLAGSDKAWMWMANDFSDGEASLEQLAAKFKTPELAE
EFKEKFEECQRLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKFFLTDEKTKIKD
DDTQGDITTSSNVSSLATKAHSETLGPTLEWDNYDLREDALDNTADSSVYASPIAGSPLR
KNLFRFGESIGGFSFSFQPGISPSKSPAKLNQSRSSVGTDDEQDEERDGQYFEPVVPLPD
LVEISTGEENELIVFSHRAKLYRYDKDLGQWKERGIGDLKILQNYDTKRVRLIMRRDQVL
KICANHWITAAMKLEPMKGAEKAWVWSAMDFAEEGEGNIEQLAVRFKLLDTANVFKQVFG
EAKVAQDKKELMTPVTSGVVTFQNTGPEESAKTAAPAVCGSAAIAVLEETTKERTELLPD
SVQCVPVSPTPVNSSKTVVSPPKFVFGTDSLQKIFGSPKSHSDTEESTSSLNARDAGLLA
KGLPASPAFKIPEKGPPQAEGRDAGSDDDSEVEVVYVREPTAEQEALAKKLLLPLTFFCY
QNEPGYSSDYETDDEDYESAVKALNGKLYPDPPGATACSDEPDCQVVWEKTPTPQEEEKA
KSLQLPPTFFCGLSTTDSDTDPDKPEDFETEIRKAQQDLDAQLKMGINLSRTAVASEEPA
PGTSSTDTVDSTSTPQEQTSEQPTETQSEARSSSCPIDLSTKKSPELESITETAASTISM
AISKDSPFGFNSLGGSSFADLAKNTDGFAFGNQDSSFSWANAGAMVFGAAVNSAPKKGGD
DQGSDEEEAPNNEDIHFEPIVSLPEVETKSGEEDEEILFKERAKLFRWDRDLGQWKERGI
GDLKILFHPTKHFYRILMRREQVFRVCANHIISEAMELKPMNVAANALLWTATDYSDGDG
AVEQLAAKFKTPELAESFKKTFCECQKRLVLSEDSSISPQMSRVQAHSRDTNPQVFLQVS
ADGETLGTVTIELFSQVVPKTAENFRVLCTGEKGFGLRDSVFHRVIPDFMCQGGDITNSD
GTGGKSIYGSKFEDENFSIRHTGPGILSMANRGRDTNNSQFFITLKKAEHLDYKHVAFGW
VRDGMSVVQQMGKLGTKGGTPTKKLVITDCGQL
NT seq
9102 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaagtaaggccgaagtggatcgttacgtttcctcaattcagagttcctctccc
tcactcaaagagaaaccagtgaaaggatttatatttgctaaattgtactttgaagcaaag
gaatatgaacttgcaaaaagacatgtatcggagtatctcaaagtccaacagagagacccc
aaagcacacaaattccttggacagctgtacgagagagaaggagacattaataaagcagta
ggatgttacaagcggtcagtggacctgaacccagcccagagggacctggtgttgaaggtg
gctgagttactggttaatacggaggaatgtgatggcagagcagagttctgggtggagaag
gctgcaaagctgctgccaggaaacatagcagtcttcaacctgaaggagcgtttgttaagt
cgtcagggtcagcagggttggaatcgactttttgacctcctccaggctgagctggcagtg
aggccgggtgatgcacatgtaaacgtgaagctggttcagctgttctgtcaggatggtcga
ctggatgaagctgtcaagcattgcctggctgctgagaaaaggggcatgctaagccgtagt
ttggactggtacacagttgtggtgcgcacattgaaggaatatttggctctgcccagcata
gccagcaatgaaaagatgtgtcgccgtctccagggagagttgctgttggcccactgcaac
ctgctgagaatctcactgtccgagagccgagtgcagtccagtcttgatgcgctcaaaggt
tttgatcaagcgatgcacctgctgagcagcgttgcaggccgctacaccgacgatctgtgt
gaggtgtatgtggagatgagaggtcacctctaccttcatgctgccacactgctgttgaag
ctggctcaggatcgccagcaatcctggagggatgttgcggactttgctgtactctgctac
ctgctagcataccaggtccctcgaccaaagcctaaaattaaaagagaccagtcagcgcca
cagcttctcgaactactggccaacgatcgacagagtcaggctggacacatgttgctcaat
ctgagcatggattcgtctacttcaatcggagaggtggtggaggcatttggtaactgcagt
ggtcgggactccctgtctgaactcctgtttggaccgcaggcctccactggatcttcattt
attgccaatgatgacattcgttcaatcaacacctctgttccagagctatctcaattggcc
aaatatgacactggctccattcaactgcatggtggtgacttgcaacatctgagctggttg
gggctgcagtggacatttcgagcccaaagaccagcactgcgggattggctagggcagctt
tttccaaggcttcccctggaaacttccaaactggacacggatgcaccagaatccatctgc
ttactagacctcgaggtgtttttactcggtgtggtgttctgtagccactgtcagttacaa
gagacagcgaagatcagcagtggaatgaaccaacagcagcaacagcagcagcagctttat
gagccacgctgcctcccccttcctctccttcgcctcttgaccactgacagacagagggag
tggtgggatgctagctacagcctcattcacaatcgagcagcccccaacatgtcagccaag
ctacgcatggttattcaacatgggctgaaaactctgagggctggagagaaacatggactt
caaccagcactggccatccactgggcccagtctcttaaccagacgggtgatggagtaaac
tcctactatgaccagaaggagtacattggtcgtagtgtccactactggaaggtcgtcctc
ccgctgttggaaaaaatcaaaaacagacgcagtatacctgaaccccttgacccactcttc
atacacttttcctctaaagacattcggattacgtctgtgaagacttatgaagaggaattc
aacatagcatatgcggctctccttgatattgaaggcaggacagaggaagccattgctaca
ttggaaaccatcaataacatgtcctccatctggcatttggcccagatctaccagcggctg
tcggaggaggccagcaatggggttgaggaaacccaagataggtgcatcacttatctgaga
aagttcaggacctacctgtctaagatctacaatgccaatgctgatgactttgagaagctg
cctgtgtccatggaggaagttctcgacctcctgaatgatgtgaaccagcagctaggagaa
aatggggaggcaatggatgaggaggaggagggtcaacgaggaccagtccactctagtcct
gctcatcctacagaaaccaatgccaccatttcccactcacacatcaagttttcaactccg
tctcccaacaaaagcatcatctctccgtccaaaagactgatttctccaaagacaccacct
cagtgggtggatgaccagaaaagtctccttcagatgctgtgtcagcaagttgaagccctc
aagaatgaagttcatgatttgaggcacaacgcttcagggaacgcaggctctcctcatcat
aagatgtatggggagagctacggggctgaaggcctacaggagtcttttacaccagttcag
tcctaccatggtgcccccctaacagttgccaccacaggtccctctgtgttttacaaccag
tctccagcttataactctcagtatctcctgcgcacagcagcaaatgtaacccccactaag
ggcccaatgtatggtatgaaccgtatgccacctcagcagcatatgtatgcttaccaacag
cccactcacacgcctccattgcaaacagccccaccctgcatttaccccccacaagaacaa
gtttttggtgcccctctgcgatttgaatcaccagccacaagcctcctttccccatatagt
gaagaatattatggccagagtgtaacccaacaaaccattaacccacctctacctgaacct
ggctacttcaccaagccatctgttgttccttctcagacgccaaagagcgcagagggtaag
cccatggactttgggaaagtgtcattcagccagcaggcacctgctgaagttcccaaagtg
cctagttttggagcaggggcagttgcccagtcaacaccttcagctggtttcaaattcaac
tccaactttaaatccaatgatggagatttcaccttcccaccttctcaggccaagaacagg
gaaaccctacttggcctccttacatcagacatccctactaaacaggagactgttgtagaa
aaatcccctgctcaggagcagcccattagccaaagtggtgttttcacctttggtactaaa
agtgttccaagcttctcttttgttgatactactcaaagcactggtactggaagtctgttt
ggaaaagtgaaccagccatttaaatttggtgatgttgccatgccagtgtttgggttatcc
agtggtgtagcagaggcagagaaagcagcagagagtgacaatgacagtacccgtggtgag
gatgaagaggatggccctcattttgaacccattgtacctcttcctgataaagtagatgtt
aaaaccggtgaggaagaggaggaggagatgttttgcaatagggcaaagctgtatcgattt
gacaccgagtcaaaagagtggaaggagagaggtattggcaatgttaaaattttaaaacac
agcactaaagggaaggtccgccttttaatgcgaagggaacagatcttgaagatctgtgcc
aatcattacattaccactgatatgctactgaaaccaaatgctggttctgacaaatcctgg
gtgtggaaagccattgattatgcagatgaagaaccaaagccagagcagctagcaatccga
tttaaaactgttgatgaggcatctcttttcaaagctaagtttgaggaagcccagagaatt
gtggtcaaatcacctgaaaagactgttcaaaaggaaaagggagagggaagcttaaaagat
tctaaatcactggcagcacagttcgcaatcaaagaaggggaatgggactgtgatgtgtgc
tgtatcagaaataagcccacagatatgaaatgtgttgcatgtcagagttccaatcccaat
gctacatcaaagccagacgttaatgctgctggtgatagcaaagccagtacttttgatttc
aaatttggaaccgattcatcacaacctagtagttctgtctctacatttactggctttgga
gcttttggggcttttggagatagtaagacctcttttacatttgggactggtgcctcaaaa
cctgctgacatagtaaccagttcattttgttctaactttggagctcaatttgcaaagaag
ccaggacagtgggaatgtgaaagctgttctgtgagaaatgaggccactgcagattgttgt
atttcttgcaaagctcttaaatccccagctataacaactgttacagcacaaaccacacca
gctgcagaaccacctgtagtgcagtcctcttcatctgctagtgactatgggtttggtgcc
cagttcagcaagaagccggggcagtgggactgtgatgtatgtgaggtcagaaatgaaatc
tctgctgacaaatgtgttgcttgtagtagcccaaatccaacttctaaattaaaagtaggg
gctccaatatcatcaaatctgccagcagtgtcaggatttgggtctgatttttcaaagaaa
gacggcgagtgggactgcgattgttgtttggtcagaaatgatgcatcagctgctaaatgc
gtttcctgccaggccccacatgagaaaccttctttagaagccatgtttgccaagaaaggt
ggagaatgggattgtgacacttgtctggtgagaaacaatggctttgccagtaaatgtttg
tcttgtcagtcaccaaatcccactgctaaaagcacaaccagcactgctcccagtgcctca
acttttaactttagctttggaaccaagactctgacaagtcagccaaccggaactggattc
acaataccttctgaaagtggcaatacttttcagtttggtcaaaacaaagataaaagctcc
gctgcttctttcaagtttgaagcctcccagtctggatctaccaccagttcttcaggcttc
tctttctcaatgcccatccctactggtggctttaaatttggcattcaagacactgcaaaa
gaacccccctcaactgatgatccagcacctccttcagggtcagcctccagttttctgaaa
agcatagctgacaaacacaatgagaaacaaaatatatctacaccagaagtggacccagct
gaacaagatcaaaacccattaatttctggaaaacccaatacattcagttttgctgacctg
gcaatgtcctctggaggtgattttcagttttgccagaaagatccaaatttcaagggtttc
gctggggctggtgagcaggtgttatcatcttttcaggcaacccctaccaaaacggatgcc
tcaaatgagctggaggatgatgacatgtataaaacggaggaaaatgatgacattcagttt
gaaccagtggtacagatgcctgataaggttgacctagtgacaggagaggaagatgagcag
gttctttattctcagcgtgtcaagctgttcagatttgacccaaccaccggccagtggaaa
gagcgtggtgtaggaaacctcaaatttctgaaaaacaatgccaatggcaggctcagagtg
ctcatgagaagagagcaggttctgaaggtgtgtgccaaccactggatcaccaccacgatg
aacctgaaacccttggcaggctcggacaaagcatggatgtggatggccaatgacttctct
gatggagaggctagccttgaacagttggctgctaaatttaaaaccccagagcttgctgag
gagtttaaggagaagtttgaagagtgtcagagattgcttttggatatccctctacaaact
ccccacaagcttgttgacacaggtagaacagcacatctcattcaaaaagcagaggaaatg
aaatctggtttaaaagacttgaaattctttttgacagatgagaagacaaagataaaagat
gatgacacgcaaggagatattacaacgtctagcaatgtttcaagccttgcaaccaaagct
catagtgaaactcttggtcccactttggagtgggacaactatgacttacgagaagacgct
ttagataatacagctgactcatctgtctatgcatctcccattgccggtagccccctaaga
aaaaatcttttccgctttggagaatccattggtgggttcagcttcagcttccaacctggc
attagtccatctaagtcccctgctaagcttaaccagagcagatcatcagtaggtactgac
gatgagcaggatgaggaaagggatggccagtactttgaacctgtagtccccctacctgat
ctggtggagatttctacaggagaggaaaatgaactgatcgttttcagtcacagggccaaa
ctgtatcgctatgataaggacttgggtcagtggaaggagaggggtattggagacctcaaa
atattacagaattatgataccaaacgagtgaggttaataatgaggagagaccaggtactt
aagatttgtgccaaccattggatcacggctgccatgaagctggagcctatgaaaggtgct
gagaaggcctgggtctggagtgccatggactttgctgaagaaggagagggtaatattgag
cagttagctgtaagattcaagctgctggatactgcaaatgtattcaaacaagtctttggg
gaggctaaggttgcacaagataaaaaggaacttatgactccagtgacatcaggagttgtc
acatttcaaaacactgggcctgaagaatctgcaaagactgctgctccagctgtatgtggg
agtgcagcaatcgctgttctggaggagaccactaaggaacgtacagagcttctacccgac
agtgtgcaatgtgtacctgtgtctccaacaccagtcaactcctcaaagacagtggtgtct
cctcctaagtttgtctttggcactgatagtcttcagaagatttttggcagtccaaagtct
cactctgacactgaggaatcgacatccagtttgaatgccagagatgctggacttcttgcc
aagggcttgcctgcatcacctgctttcaaaatcccagagaaagggcccccacaggctgaa
ggaagagatgcagggtcagatgatgactctgaagtggaagttgtgtacgtcagggaaccc
actgctgaacaggaagctttggccaagaaactcctgctgccgctcaccttcttctgctac
cagaatgaaccgggttactccagtgattatgaaactgatgacgaggattatgagtcggca
gtgaaagcattaaatggaaagctgtaccccgatcctcctggggccacagcatgtagtgat
gagccagactgtcaggtggtgtgggagaagacgccaacgccacaggaggaggaaaaggcc
aagagcctccagcttccacccactttcttctgtggcctgagcaccacagacagcgacaca
gaccctgacaagcctgaagactttgagaccgaaatccgcaaagcgcagcaagacctggac
gcccagttaaagatgggcattaacttgagccgcactgctgtagcctcagaggagccagca
ccaggcaccagcagcacagacactgtggacagcacatctacaccacaggagcagacctca
gagcagccaacagagactcagagtgaagctcgtagcagcagctgtccaattgacctgtca
acgaagaagagtccagagctggagtccatcaccgaaactgcagcttctaccatttctatg
gccattagtaaagactccccctttggtttcaactcactcggcggctcctcattcgctgac
ttggcaaaaaacacagatggatttgcatttggaaaccaagactcgagcttctcttgggcg
aatgccggagcgatggtgtttggggccgcagtgaactcggcacccaaaaaaggaggcgac
gaccagggcagcgatgaagaggaggctcccaataatgaggacattcactttgaaccaata
gtgtcactgccagaggtggagacaaagtctggtgaggaggacgaggaaattctgtttaag
gagcgtgccaagctgttccggtgggacagagaccttggccagtggaaagagcgcggcatc
ggcgacctcaagatcctcttccacccgaccaaacatttctaccgaatcctaatgcgaaga
gagcaggtgttcagggtttgtgccaaccatattatctcggaggcaatggagctcaaacct
atgaatgttgccgctaacgcgctgctgtggaccgccaccgactattcagacggcgacggc
gcagtggagcagctggcggccaagttcaaaaccccagagttagccgaatccttcaagaag
acattctgcgagtgtcagaaaagattggttctaagtgaggactccagcatctcaccgcag
atgtctagagttcaagcgcactccagggacaccaatccgcaggtgtttctccaagtgtcc
gccgacggcgaaaccctgggcaccgttaccatagagcttttctcccaagtcgtgccgaag
acggcagaaaatttcagggttctctgtactggcgagaaaggctttggactgcgggactca
gtcttccacagagtcataccagacttcatgtgtcagggaggtgacatcaccaacagtgac
ggcacaggcggtaagtccatctacggcagcaagtttgaggacgagaacttcagcattcgg
cacacaggcccggggattctgtcgatggccaaccgtggacgcgacaccaacaactcgcag
ttcttcatcacgctgaagaaagccgaacacctggactacaaacacgtggctttcggctgg
gttcgggatggaatgagtgtggtgcagcagatggggaagcttggcaccaaaggaggcacg
cctacaaagaagctggtcatcacagactgtgggcagctgtag
DBGET
integrated database retrieval system