Solea senegalensis (Senegalese sole): 122774442
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Entry
122774442 CDS
T07721
Name
(RefSeq) terminal nucleotidyltransferase 4A-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122774442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122774442
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122774442
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122774442
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122774442
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122774442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
122774442
NCBI-ProteinID:
XP_043889656
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All DBs
Position
LG9:14452223..14463888
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AA seq
811 aa
AA seq
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MDPRTAWIQPEQKGPANSLWMHIWETSQGFGANSDIDNHLHLQRNFAAHNTNSVDSDGEY
YKIVAPPPGVVFGKQSKRGGGDRGSVRRKGSLSPSSSSLDSEAESSSPSGSSLQIDNLNV
AEEATRFLHYGEHELNENNLRRQFPPPPFHSVQQHCRSMQQSSSGHTPTGMKNQHGNKHH
HHHPQPHSSGRRRHLNRANTFHGINPLLSYGCNGQYLDSSCSLWKTRRYSPGINGLHEEI
VDFFNFMSPRPEEEAMRTDVVNRIESVIKNLWPTARVEIFGSFSTGLYLPTSDIDLVVFG
KWEHPPLQELEQALRRHNVAGKYPIKVLDKATVPIIKLTDHETEVKVDISFNVETAVKAA
QFIKSYLKKYTVLPALIFVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDTRR
ANINLGILLIEFFELYGRDFNYMKTGVRVKSGGAYLSKEEMLKAMGSGNRPSMLCIEDPV
QPGNDVGRSSYGVLQVKQVFDFAYMVLSHGVSPLARAYPNKEYDSTLGRIIKVSPEVLAY
REWTIKKWEAKQYAKLENHDIDTCEQDLARLMLVSVEDQRDSSSPLSADSPSPSPVFLPS
PQHHSSSSSSSSACSLSSSGSDIESDSPPISNATIQLHPLTLASVHPVIQMATDLRATHA
GFIHTIPQLQMSLPENLTIPSLSDCQFYHENPPSIRVVHRQTSQAAQQHANSTSPLPSPL
HRLHHTQAGVQQSQTYTNSHGSIELHKFSFKHNQGGSLRSQNPPQGNFSPQQRFVPQCHN
MAPGFRNQQQYNRNTWRRRKRDDVPALNQSR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaggaccgcttggatacagccggagcagaagggacctgccaattccctgtgg
atgcacatttgggaaacatctcagggatttggtgcaaactccgacatcgacaaccacctt
cacctccaacgcaacttcgcagcgcataatacaaactccgtggactctgacggcgagtat
tacaaaattgtagcgccgcccccgggggttgtgtttgggaagcagtcgaagcgaggcggc
ggagaccggggtagtgtccggagaaagggctcgctgtcgccgtcctcctcctccttagac
tcggaggccgagagctcctcgccctccggctcctctctgcagatagacaatttgaacgtc
gccgaggaggccactcgctttttacactatggcgagcacgagctaaacgagaacaacctg
aggcggcagtttccccctccgccgtttcacagcgttcagcaacactgtcgcagcatgcaa
cagtccagcagcggccacacccccacgggcatgaaaaatcagcatgggaacaagcaccac
caccaccaccctcagccccactcctccggccgcaggagacatttgaaccgagccaacacg
ttccacggcatcaacccgctcctgtcctacggctgcaatggacaatatttagactcttca
tgtagcctgtggaaaaccaggcgctacagcccgggcattaatggtctacatgaagagata
gtggacttcttcaacttcatgtcaccacgaccagaggaggaggccatgagaacggatgtg
gtgaacaggatagaaagtgtcatcaagaacttgtggcccacagcacgagtggagatattt
ggcagcttcagcacaggactttatcttccaacaagtgacattgacctggtggtgtttgga
aagtgggagcatcctccgctacaggaactcgaacaagccctaagaaggcataatgtagct
ggcaaataccccataaaggtcctggacaaagctacagtgccaatcattaagcttacggac
catgaaacggaggtgaaagtggacatcagcttcaatgtagaaactgctgtcaaagcagca
cagttcatcaaaagctaccttaagaaatacaccgttctgccggctctgatcttcgtcttg
aagcagttcctacttcagagggatctgaacgaagtcttcactggaggcatcagctcttat
agcctcatactaatggccatcagcttcctgcagttacatccccggatcgacacgcgacgt
gccaacataaacctgggcatcctgctgatcgagttctttgagctgtacggtcgcgatttc
aactacatgaaaacgggcgtccgggtgaaaagtggaggggcctacctgtccaaggaggaa
atgcttaaagccatggggagtgggaacagaccatcaatgctctgcattgaagatccagtc
cagccaggaaatgatgttggcaggagttcttatggcgtccttcaggttaagcaggtgttt
gactttgcctacatggtgctgagtcatggagtgtcacctcttgcacgtgcttaccccaac
aaggagtatgacagtactttagggcgcatcatcaaggtcagcccagaggtgttggcctac
agagagtggacaatcaaaaagtgggaagccaagcaatatgctaagctggagaaccatgat
atagacacctgtgagcaggaccttgccagactcatgctggtttctgtggaggatcagaga
gacagctcctctcccctcagtgctgactccccctcaccgtctccagtctttcttcccagc
ccccagcaccactcatcatcatcatcatcatcctcagcatgctcgctctcctcctctggg
agtgacattgaatctgattctcccccaatcagtaatgccactatccagctccaccccctc
acgctggcctcagtccatccagtaatccagatggctactgacctgagggccacacatgca
ggcttcatccacaccataccgcagctccagatgtccctcccagaaaacttaaccatcccc
tccctctctgattgccagttctaccacgagaatccaccctcgatcagagttgtgcaccgt
cagacatcacaagctgcacagcagcacgccaactccacaagccccctccccagccccctc
caccggctccaccacacacaggctggggtgcagcagagccaaacgtacaccaattcccac
ggatccattgagctgcacaaatttagcttcaagcacaaccaaggtggcagcctccgaagc
caaaatccccctcaaggtaacttcagtccccagcagcggtttgttccccagtgtcacaac
atggcaccaggcttcagaaaccagcagcagtataaccgaaacacctggagacgcagaaag
agggatgatgttcctgctctcaaccaaagtagatga
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