KEGG   Solea senegalensis (Senegalese sole): 122774618
Entry
122774618         CDS       T07721                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122774618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssen03041]
    122774618
Spliceosome [BR:ssen03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122774618
 Complex B
    122774618
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 122774618
NCBI-ProteinID: XP_043889997
LinkDB
Position
LG9:20835291..20844870
AA seq 476 aa
MSDFDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSFPQDNAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQPINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLSSMNQTPVTLQ
VPGLNSTVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtcggacttcgacgaattcgaaaggcagctatctgagaacaaacaagctgaaagggac
aaagaaaatcgtcatcaccgccggtcctcgtcccgcagccgcagcagagagaggaaaagg
aggagcagagatagggacagacgcagcagggaccgccgtggggacagtaaggagcgccgg
cacagacgcagctcaccatccagcttccctcaggacaatgctggaagtcgttcaccccac
cgtgaaaagaagaagaaggtgaagaagtactgggatgttcctccacctggtttcgagcat
atcactcccatgcagtacaaagccatgcaagctgcaggccagatcccagccacagccctg
ttgccgacaatgactccagatggtctggctgttactcccacacctgtacctgtggtgggc
agccaaatgacccgacaggcccgtcggctttatgtgggcaatatcccctttggtatcaca
gaggaatccatgatggacttcttcaatgcccagatgcgtttgggtggccttactcaggcc
ccaggaaaccctgtgcttgctgtacaaatcaaccaggataagaattttgctttccttgag
tttcgttcagtggatgaaactacacaggcaatggcctttgatggtatcatctttcaaggc
cagagcctcaaaattcggcgtccacatgattaccaacccctgccgggcatgagcgagaat
cccagtgtctatgtgcctggtacacagccaattaatggtgtggtgtccacagtggtgcct
gactcggctcacaagctcttcattggtggtttgcccaactacctgaatgatgaccaggtg
aaggagctgttgacatcatttggccccctgaaggccttcaacctggtgaaggacagtgcc
acaggcttatctaaaggatatgccttctgtgaatatgtggatgtcaaccttaatgatcag
gctattgctgggttgaacggcatgcagctgggagacaagaagctcctggtgcaaagagcc
agcgtgggatccaagaacgccactctgtccagtatgaaccagaccccagtgacgctccag
gtgccaggtctgaacagcacagtaactcagatgggaggcctgcccaccgaggtgctgtgt
ctcatgaacatggtggcacccgaggagctgctggatgatgaggagtacgaggagatcgtg
gaggacgtcagggatgagtgcagcaagtacggtcaagtcaagagcattgagatccctcga
cccgtggatggcctggaagtgcctggaactggcaagatctttgtggaattcacatccgtt
ttcgactcccagaaggccatgcagggattgacaggaaggaagtttgccaacagggtggtg
gtgaccaaatactgcgatccagacgcataccaccgccgggacttctggtag

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