KEGG   Solea senegalensis (Senegalese sole): 122774776
Entry
122774776         CDS       T07721                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    122774776 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssen04131]
    122774776 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122774776 (rab13)
   04031 GTP-binding proteins [BR:ssen04031]
    122774776 (rab13)
Membrane trafficking [BR:ssen04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    122774776 (rab13)
Exosome [BR:ssen04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122774776 (rab13)
  Exosomal proteins of colorectal cancer cells
   122774776 (rab13)
GTP-binding proteins [BR:ssen04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    122774776 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 SRPRB PduV-EutP Septin RsgA_GTPase AAA AAA_7 SecDF_P1_head AAA_22 AAA_16 FeoB_N
Other DBs
NCBI-GeneID: 122774776
NCBI-ProteinID: XP_043890228
LinkDB
Position
LG9:19643915..19649822
AA seq 200 aa
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIRENASAGVSRMLLG
NKCDIEAKRKVSKETGEKLAKDHGIMFFETSAKSSINVEESFLSLARDILQKNSKKSGPT
GREVKITSSTEKKSSKCALL
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgaaaaagtacgatttccttttcaaactgctgctgatcggggacagcggagtgggg
aaaacatgtctcatcatccgatttgctgaggacaatttcaactccacttatatttcaacc
atcggcattgactttaaagtaaaaaccattgaagtggatggaaagaaagtgaaactccaa
gtctgggacacagcagggcaggagaggttcaagaccattacaacggcctactacagagga
gccatgggcatcatcctcgtctatgacatcacagacgagaagtcctacgaaaacattcag
aactggatgaagagcatcagagaaaatgcatcggccggggtcagtcgaatgttgctaggt
aataagtgtgacatcgaggcaaagcgcaaggtttccaaggagacgggagaaaagctggct
aaagatcacggcatcatgttctttgagacgagtgcaaagtccagcattaatgttgaggag
tcttttctgtctttggctcgtgacatactacagaaaaacagcaagaaatcaggacccacg
ggccgagaagtgaaaatcaccagcagtacagagaagaagtcttccaagtgtgctctcctc
tag

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