KEGG   Solea senegalensis (Senegalese sole): 122774851
Entry
122774851         CDS       T07721                                 
Symbol
atg5
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04136  Autophagy - other
ssen04140  Autophagy - animal
ssen04145  Phagocytosis
ssen04216  Ferroptosis
ssen04621  NOD-like receptor signaling pathway
ssen04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122774851 (atg5)
   04140 Autophagy - animal
    122774851 (atg5)
   04136 Autophagy - other
    122774851 (atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    122774851 (atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    122774851 (atg5)
   04622 RIG-I-like receptor signaling pathway
    122774851 (atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssen04131]
    122774851 (atg5)
   03029 Mitochondrial biogenesis [BR:ssen03029]
    122774851 (atg5)
Membrane trafficking [BR:ssen04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    122774851 (atg5)
Mitochondrial biogenesis [BR:ssen03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    122774851 (atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF8018
Other DBs
NCBI-GeneID: 122774851
NCBI-ProteinID: XP_043890346
LinkDB
Position
LG9:complement(5538155..5566998)
AA seq 275 aa
MADDKDVLRDVWFGRIPTCFTLNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVM
KAEDVGEIWFEYEGTPLKWHYPIGVLFDLHAFNTVLPWSITVHFKNFPDQDLLHCSSNSV
VEAHFMSSIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYSTEEE
GFRYIPFRIYQTMSDRPFIQKQFRPVSPEGKVHTLGILLKEMYPAAIPNEGEQKRYQAVI
HGIEPLLETPLQWLSEHLSHPDNFLHICIIPVPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atggcggatgacaaggacgtactgagagacgtttggttcggccgtattcccacctgtttc
actctgaaccaggatgaggtgactgagagagaagccgaaccctactatctgcttttaccc
agagtgagctacctcaccctggttacagacaaagtgaaaaaacacttcctcaaagtgatg
aaggccgaggacgtgggggagatatggtttgagtatgaaggaacaccacttaaatggcac
tatccaattggagttctttttgacctccatgccttcaatactgtcttaccctggagcatc
actgtgcactttaagaactttccagatcaggacctgctccactgctcgtccaactctgtg
gttgaagctcatttcatgtccagcatcaaggaggccgacgccctcaagcacaagagccaa
gtcattaacgacatgcagaagaaagaccacaaacagctgtggatgggtctgcagaatgat
aaatttgatcagttctgggccatgaacaggaagctgatggaatattctacagaggaggaa
ggcttcaggtacatccccttcaggatataccagacgatgagcgacaggccattcatccag
aaacagtttcgtcccgtttcacctgagggcaaagttcacacacttggcatcttgctgaaa
gaaatgtatccagctgcgatacccaatgaaggtgagcagaagcgttaccaggctgtgatc
cacggcatcgagccgctgctggagactcctcttcagtggctcagcgaacacctaagccac
cccgacaacttcctgcacatctgcattatccccgtccccactgactga

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