Solea senegalensis (Senegalese sole): 122774893
Help
Entry
122774893 CDS
T07721
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122774893
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122774893
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122774893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
Ank_2
Ank
IBR_2
Ank_5
Ank_4
Ank_3
UBA_ARI1
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122774893
NCBI-ProteinID:
XP_043890421
LinkDB
All DBs
Position
LG9:12819357..12850236
Genome browser
AA seq
1119 aa
AA seq
DB search
MGNTATKFRKALINGDEVLALQLYESNLQFKEALDPNATYGESYQHNTPLHYAAQHAMTR
LLRSFLLSKDGNPNKRNVHNETSLHLLCMGPQILISEGALHPRISRPYEDEQRRAECLQI
ILAWTGAKLDHGEYERANVNTTDNKKNTCLHYAAASGMKSCVELLVQREADLFAENENRE
TPCDCAEKQHHKELALCLESQMVFSTAPEADGIEAEYAALDRRELYEGLRPQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMIDAEECCQRSGVQMPNPPPSGCNAW
DTLPSPRTPRTPRSSITSPDQISLMPADDESSLCGICMSSISDFEEPVDMSCGHDFCRVC
WEGFLNLKIQEGEAHNIFCPAFDCYQLVPVEVIESVVSREMDRRYLQFDIKAFVENNSAI
RWCPMAGCERAVRLNTQGPGTSTSDPLIFPLLRAPAVDCGKGHLFCWECQGEAHEPCDCE
TWKLWLHKVTEMRPKELAGVSTAYEDAANCLWLLTNAKPCANCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTEEAEKKHKSFQELDRFM
HYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALSGREGGPPDTTFIEDAVLELLKTRRI
LKCSYSYGFFLEPKSTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHRIIRAACLVQQ
KRQEFLASVARGVAPNDSPDAPRRSFAGGTWDWEYLGFASPEEYADFQYRRRHRQRRRGD
MSSLRSNTPDPDDPSDSILDAQDIGGGRRQGTLMGLGSLDDDDPNILLAIQLSLQDSGLA
GSGSSHEVLANEASLGAIGTSLPSRLEQSAPGVEVLPRASLSSSELLELGDNLVRLGNIN
ISSQYSAATTLTTSVHHYDSHHRAYGASLPIPMAPDSSSSTGIFSSSDTVDSTSCSNHDQ
SSSSALAANANLLGNIMAWFHDMNPQSITLVSSTSSDTDSNLGALHTGRAVCPQEDEKAG
VVVLPQEVMAEVGFCSQRLSDLEERQKDGILAERPTQLDLVGLDTTSLPYMASLDPSADR
PAEHGGPKVRHVDTPQCDSVSDQLPSTSSSEWEDQVHLV
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggcaaccaagttccgtaaggctctcattaatggggatgaggtgttggct
ctccagctctatgagagcaacctgcagttcaaggaggctctggatcccaacgctacatac
ggagaatcctaccagcacaacacgccgctgcactatgctgcccagcacgcaatgacgcgc
ttactcaggtcttttctcttaagcaaagatggaaatcctaacaagcgtaatgtgcacaat
gagacatctctgcaccttctctgcatggggccccaaatcttgatctcagaaggagcacta
catcctcgaatctcacggccatatgaagacgaacagcgtcgtgccgaatgtttacaaatc
attctggcatggactggagcaaagcttgatcatggggagtatgaacgtgctaatgtcaac
actacagacaacaagaaaaacacctgcctgcactatgctgctgcctctgggatgaagtct
tgtgttgagttgctggtgcagagagaagcagacctgtttgcagagaatgaaaaccgcgag
actccgtgtgactgtgcagagaagcagcaccacaaggagctggccttgtgcctggagtcg
cagatggtcttttcgactgcccccgaggccgatggtatagaggcagagtacgcagctctt
gaccgaagagagctatatgagggtctgcgacctcaagatctgcggaggctgaaggacatg
ctgatagtggagacggctgacatgctgcaggcccccctcttcactgcagaggcactgcta
cgtgcccatgattgggacagagagaagctcttagaggcctggatgattgatgcggaggaa
tgctgtcaacgctcaggggttcagatgcccaacccacctccaagtggctgcaatgcctgg
gacaccctgccatcgcccaggacgccacgcacccctcgctcctccattacctccccagac
caaatcagcctcatgcctgccgatgacgaatcttctctgtgtggtatctgcatgtcttcc
atctctgactttgaggagcctgttgacatgtcctgtggccatgatttctgcagagtatgc
tgggaaggatttctcaatctcaagattcaagaaggtgaagcccataacatcttctgcccc
gcctttgactgctaccagctagtgcctgtggaggtcatagagagtgtggtatcgagagag
atggacaggcgctatctacagtttgacatcaaggcatttgtggaaaacaattcagcaatt
cgctggtgtcctatggccggatgtgaaagggctgtgcgattaaacacccagggtcctggg
acctccacttcagaccctcttatttttcctcttcttcgtgcccctgcagtcgattgtggc
aaaggccacctcttctgctgggagtgtcaaggcgaggcgcatgagccttgtgactgtgag
acttggaaattgtggctacataaagtcactgagatgaggcctaaggaattggcgggtgtg
agcacagcctacgaggatgcagccaactgcttgtggttgctcactaatgccaagccctgc
gccaactgcaagtctccaatacagaaaaatgaaggttgcaaccacatgcagtgtgctaag
tgtaaatacgacttctgctggatctgtttggaagagtggaaaaaacacagttcatcaaca
ggaggctactatcgctgcacccgctacgaagttatccagcaggtggaagagcagtcaaag
gaaatgacagaagaggcagagaagaaacacaagagctttcaggaactggaccgtttcatg
cactactacacacgcttcaagaaccacgagcacagctatcagctggagcagcgcttgtta
aaaacagccaaagagaagatggagcagctgagtcgagctcttagtggaagggaaggaggt
ccacctgacactacattcattgaagacgcggtcctagaactgctaaagactcgccgcatc
ctgaagtgctcttattcctatgggttcttcctggaacctaaaagcacaaagaaggagatc
tacgagcttatgcagacggacttggagatggtgactgaggaccttgctcaaaaagttaac
cggccatacctgcggacaccgcgccacagaatcatccgtgctgcgtgtttagtgcagcag
aagaggcaggagttccttgcctcagtagccagaggagtggccccgaatgactcccctgat
gcccccagacgcagtttcgctggtggaacatgggactgggaatatttgggcttcgcatca
cctgaggagtatgcagatttccagtatagacggagacatcggcagcggaggcgaggtgac
atgtctagtctgcgtagcaatacacctgatcctgatgaccccagcgacagcattttagat
gcacaggatatcggaggtggacgaagacaaggcacgctgatgggtcttggttccttagat
gacgacgaccctaacattttactggccattcagctgtcactccaggactctgggctggca
gggagtgggtccagccatgaggttcttgctaatgaagcctcacttggagccattggcaca
tccctgccttctaggcttgaacagagtgctcctggtgtggaggtcctccccagagcttct
ctgagcagctcagaactgctggagctgggagataatttagtgagacttggcaacattaac
ataagcagccagtattctgctgctactaccttaaccacctcagtacatcactatgacagt
caccatcgggcctatggggcctctttgccaataccaatggctccagacagtagctcatca
acaggcatcttctcatcaagtgacacggtagactcgacttcatgcagcaaccacgaccaa
tcctcatcctctgcattagctgcaaacgctaacctgctgggcaacatcatggcctggttc
catgacatgaatcctcaaagtatcaccctggtttcatcaacctcctccgacacagattca
aacctcggtgcactccatacgggtagagccgtgtgtccgcaagaagatgagaaagctggt
gttgttgtcctgcctcaggaagtgatggcagaggtgggtttctgctctcagagacttagt
gacctggaggaaaggcaaaaagacggcattctggctgagaggccgacccagttagaccta
gtggggctggataccacatcactaccttacatggccagtcttgacccaagcgcagaccgc
ccagctgagcatggaggcccaaaggtacgccatgtcgacactccgcaatgtgactccgtc
tccgaccagctgcccagcaccagctcgtctgagtgggaggatcaagtgcacctggtatga
DBGET
integrated database retrieval system
