Solea senegalensis (Senegalese sole): 122775003
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Entry
122775003 CDS
T07721
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122775003 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122775003 (rad54b)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122775003 (rad54b)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
122775003
NCBI-ProteinID:
XP_043890604
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Position
LG9:18892758..18905951
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AA seq
938 aa
AA seq
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MRRSAAPSQLFGNAVKKPRFVPPGASTVIDSKLLSPKLGLGNALEKIQKSLAAPVPSTTG
GDNQLKAAQPAPALSRALARVLNATESKENDAKLEYPETDTDFAESKRLAGVSDSSQLTP
GSPQTPRPSAGSAGAAGVDSVCSQDGACYFSVMWCKASKKKHKRWEGDAVLVTRGRTVTL
KDMEGKDIGKGSGYKVSVLASLSEGETLMIGGKEVEVMGVISAEDYAKGRCFQEVQIEKE
EPHTKSAPPSSRRFASKPFCPPTQAGRAEHPGVKPEQEQTIRPRHDPQAPGALVMPRPSA
NHQWSNNKSGLPVVDVVVDPHLTTHLRPHQRDGLLFLYECAMGMRAVGRHGAILADEMGL
GKTLQSVALSWTLLKQGPYGGKPVAKRVLVVTPGSLVQNWGAEFNKWLGRERISVFTVDQ
DHRIEQFVLSPLHSVLVISYEMLLRCLEQVQKVEFGLVICDEGHRLKNSNIKTSSALSSL
SCNRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPSCTEEERV
LGEERAAELSRLTGMFILRRTQEIINRYLPPRLEWTLFCDLSSLQLELYRQLLCHRVFRA
CLQGSTQTHTHLACITALKKLCNHPALLHSTVKEKTDRRSEDSSMYDGLAELFPESYSSG
GFNTSDSGKLLVLSDLLAAIQQLSPSDRVVVVSNYTQTLDLLQDLCVHMGYTFCRLDGHT
PTSQRQRLVDSFNSSYSQNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARV
WRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSTNELRDLFS
LTDTPSLTHDLLNCSCSMDGSVPVIVEEEEEEQVSDRPCQLGRQGDRRGAAAPKHLSMSE
LMKWRHFSGDTHTFSDPYLDHSRDHITFAFQTTISHTV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagacgctcagcagctcccagccagctctttggtaatgcagtgaaaaagcctagattt
gtgccacctggcgcatctactgtcattgattccaagctcctttcccctaaacttggatta
ggcaatgcactggaaaagatccaaaaaagcctggcagcaccagtacctagtacgaccggt
ggtgataaccagctcaaagctgcacagcctgctccagccttgtccagggctctggctcgt
gttctcaatgcgacagaaagcaaggaaaatgatgccaagctggaatatcctgaaactgac
acagactttgcagaaagcaaaagattagcaggagtgagcgattcttctcagttgactcct
gggtctcctcaaaccccgcggccctctgcaggctctgctggagctgcaggcgtggactca
gtctgcagtcaggacggagcgtgttacttcagtgtgatgtggtgtaaagccagtaagaag
aaacacaagaggtgggagggtgatgccgtgctggtgacgagaggacgcacagtcacactt
aaagacatggaaggaaaagacatcggcaaaggtagtggctacaaggtgtctgtgttggca
tctctttctgagggagagacactgatgattggtgggaaggaggtggaggtgatgggggtc
atttctgctgaggactatgccaagggacgctgttttcaagaggtccaaatcgagaaagag
gagccacacacaaagtcagctccacccagttctcgccgatttgcatccaaaccgttctgc
cctccaacacaggcaggaagagctgagcatccaggagttaaaccagagcaggaacaaacc
ataagacctcgccatgaccctcaagctccaggtgcactggtgatgcctcgaccatctgcc
aaccaccagtggtctaataacaagtcaggccttcctgtggtcgatgttgtcgttgaccca
catctgaccactcacctgagaccccaccagagagatggcctgcttttcctctatgaatgt
gccatgggcatgagagctgtgggtcgacacggtgctatcctggctgatgagatgggtttg
gggaagaccctccagagtgtggcactctcctggacgttgctgaagcaggggccttatggt
ggaaaaccagttgcaaagcgtgtcttggtggtgacacctggcagcctcgtgcagaactgg
ggagcagagtttaacaagtggctgggccgtgagaggatcagtgttttcactgtagatcag
gaccacaggatagagcagtttgtgttatctcctcttcacagcgttctggtgatcagctat
gagatgctgttacgctgcctggaacaggtacaaaaagtggagtttgggcttgtcatttgt
gatgagggtcacagattaaagaacagcaacatcaaaacgtcctctgctctcagtagcctc
agctgtaaccgcagggtcatccttacagggactccagtacagaacgacctgcaggagttt
tatgctattatagagtttgttaacccagggattcttgggtcatcaactgcttatagaaaa
gtgtatgaggaacccattctacgctccagacaaccctcctgcacggaggaggagagggtt
ttgggagaagagcgagcagccgagctctctcgcctgactggtatgttcatcctgaggcgg
acgcaggagatcatcaaccgctacctgcctcctcgtctcgagtggacgttgttctgtgac
ctgtcctctctgcagctggagctttacaggcaactcctatgtcatcgagtcttcagagcc
tgccttcagggctccacacagactcacacacacctggcctgcatcactgcactgaagaag
ctctgtaaccaccctgctctgctccactccactgtcaaggagaaaaccgaccgcaggtca
gaggacagttcaatgtatgatggattggcagaactctttccagaatcctactcttcagga
ggattcaacacaagtgattctggaaaactccttgttctgtcagacctgctggctgccatc
cagcagctcagcccttcagacagggtggtcgtagtgtctaactacactcagacgcttgac
ttgctccaggacttgtgcgtacatatgggctacaccttctgtcgactagatggacacacg
cctaccagtcagagacagcggctggtggacagtttcaacagctcctactctcagaacttt
gtgtttctgctgagctctaaagcaggaggtgtgggacttaatctgatcggtgcttcacat
ctggtgctctacgacattgactggaaccctgccaatgatattcaggccatggctcgagta
tggagagatggacagaagaagactgtgcacatctatcgtctcctcactgcaggaactatt
gaggagcgtatattccagagacaagtgtccaaacaggggctttctgggactgtggttgac
ctgggcaaaggggcggagcacaccagcttctccaccaatgaactgcgagatcttttcagc
ctgacggacacgccctctctaactcacgacctgctgaactgcagctgcagcatggacggg
tcagtcccagtcatcgtagaggaggaggaggaggagcaggtcagtgatcggccatgccag
ctcggtcgtcagggtgaccgcagaggagcggcggcaccgaagcatctcagtatgtccgag
cttatgaagtggagacatttctccggtgacactcacaccttctcagacccctacctcgac
cattcacgtgaccacatcacctttgctttccagaccaccatttcacacacagtttga
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