Solea senegalensis (Senegalese sole): 122775110
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Entry
122775110 CDS
T07721
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122775110 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122775110 (trip13)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
122775110 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_25
AAA_14
AAA_18
Viral_helicase1
AAA_24
AAA_5
AAA_RNF213_4
NPHP3_N
TIP49
AAA_33
TsaE
AAA_28
AAA_17
RNA_helicase
ATPase_2
NACHT
RuvB_N
Cytidylate_kin
ABC_tran
AAA_7
IstB_IS21
DUF815
ATPase
AAA_11
AAA_30
bpMoxR
SLFN-g3_helicase
AAA_19
Rad17
Mg_chelatase
DUF4221
NB-ARC
PduV-EutP
nSTAND1
nSTAND6
Sigma54_activat
PhoH
DUF6393
AAA_3
Motif
Other DBs
NCBI-GeneID:
122775110
NCBI-ProteinID:
XP_043890784
LinkDB
All DBs
Position
LG9:complement(17454584..17459766)
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AA seq
440 aa
AA seq
DB search
MNQRAEFNILLSGSNKRRVMEMDGDREEVGNINVEVHVKSHSTAKLSEVRMHILALLNRH
SMVFGNYRWTEFDEDFLRKNVESVAIVDIEEIVTQPLDLKSSSVSVHIFTLNEDQPSTLS
LEDDEELSAANHWLLPTAEFHGIWESLVYDSGVKTQLLDYVTTTIYFSDKNVDSNLISWN
RVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKM
FQKIQQLIDDKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHSN
VVILTTSNVTEKIDLAFVDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLFT
MFELETMGFAESEVSEHSLKLRNIAVKSKGLSGRALRKLPFLAHALFVRSPTVTLERFLE
AMERAVAKQREEKSNLVNGF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcgcgctgaatttaacatactgctttctggcagcaacaagcggcgagtcatg
gagatggatggtgacagagaggaggtggggaacatcaacgtggaggttcatgttaaatca
cacagcaccgctaaactgtcagaggtgaggatgcacattctggctctgctgaatcgccac
agcatggtttttggaaactacagatggacagagtttgacgaagactttctgaggaaaaat
gtggagtccgtggccatagtggatattgaggaaatagtaacacagccccttgatttgaaa
agctcctctgtgtctgttcacatcttcacattgaatgaggatcaacccagcacactcagt
ttggaagacgacgaagagctttcagcagcaaatcactggctgttaccaacagctgaattc
catgggatttgggagagcctggtgtatgacagcggagtcaaaacacagctcctggattat
gtcactacaacaatttacttctcagacaaaaatgttgacagcaacctgatttcatggaac
cgtgttgtgctgcttcatggaccgccaggtactgggaaaacatcattgtgcaaagctctt
gcccagaagctgacaatcagactgtcaagtcggtattcttatggccaatttgttgagata
aacagccacagcctgttctcaaagtggttctcagagagtggcaagctggtcacaaagatg
tttcaaaagatccaacaactcattgatgacaaagaagctctcgtgtttgtcctgatcgat
gaggtggagagtctgacagcagctagaaatgcctcccaggcaggaacagagccttctgac
gccattcgagtcgtcaattctgttctcacccaactggaccagatcaaacgacattcaaac
gttgtgatcttgacgacttccaatgtgacagagaagattgacttggcatttgtggacaga
gccgacatcaagcagtacattggacccccatctgagaaaggcatctacaatatctatctc
tcctgcctcgaggagctgatgaagtgccagatcatctacccccggcagcagctgtttacc
atgtttgagctggagacgatgggctttgctgagagcgaggtgtctgaacacagtctgaag
ttgaggaacattgctgtaaaaagcaaaggtttaagtggaagagcactgaggaagttgcct
tttctcgcccatgcactgtttgtgaggtcgccgacagtgacccttgagaggtttctggag
gccatggagcgagcagtggctaaacaaagggaggaaaaatctaatctggtcaatgggttc
tga
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