Solea senegalensis (Senegalese sole): 122775117
Help
Entry
122775117 CDS
T07721
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122775117
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122775117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
COPI_C
Motif
Other DBs
NCBI-GeneID:
122775117
NCBI-ProteinID:
XP_043890793
LinkDB
All DBs
Position
LG9:complement(2475233..2501844)
Genome browser
AA seq
1516 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPGGQWRPLDEDGKASSSSSSSSPSSSSSGSSGRAVEPVTDL
VVIAKGLGEEVPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPVLDLGVLYE
GKEQLKQGWYVIETTPYSRSASLSAGGGPTAHRVFLTYRRALDSQGLHTLGVTDIALLLP
SKGEVAPHTFSRVEKNLNTGMWGPGLYLCYKRAVAKANALVYEASLISRYPEEDLEAFPL
PESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFQRELLSE
RQSVRLGLLSVVDRRPITSRSLQVKKSICVLSHWPFFNVFQKFLTFIYRYSISGPHVLPL
EKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASYLKLLQNLGPENA
CTLLLAVLTEHKLLLHSLRPDVLTSVSEALISVSFPLRWLCPYIPLCPLQMADVLLAPMP
FVVGVHSSYFDLYDPPADVVCVDLDTNTIFQSDEKKPLSWRSLPRRPGKALFNTLTSLHK
TLEKICTPGQEEATLEFLLTDYDQIYRRQKQLELEIQEGFLRFMSCLLRGYRSFLLPITQ
APSDTTTDCSSLFNLQGFLKSRDRTQQKFYNQLTRTQMFTQFIEECSFVSDRHACLEFFD
ECVQKVDVEKPEEVRLIDLDETHSGEHTVFIMPPEEPQEADGSECPALYSYETFPTLRPE
LFDQPQDQLRPPAKGSAPSSPAPRRTKQEIKLAQKRAQKYASVPDMWSKCLLGHCYGLWF
IYLPTFVRAESAKVRTLHTAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPVLAVRVL
LEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRRPLKRKKS
GSVGSRGEAMTEPDQRLHPQSTLIRQSSWSGLSESSSHESLTGPLVKSNSLSSMKTSSDK
VKLFKKTMLRNAGTDSCGEAVSRKPPLGPRDASATPPAPPVGGGVLVKRSQVCLSNFYKE
CAESAGSEPDCSCQPAERDGRPVGVRDTAGRNKVVDENYNNVSSPSRGLAGKLQQLLTPT
RHRVSVRRAASVDDRRPGGGGGGVGRRVSEQRQSRKAQVAETLLKAKDRLVNATSESSLS
VGSDLDLTDTPTAAFPLRRSWDANQEAAGLEVLISSCSLCRSCNSLVYDEEIMAGWTSDD
SNLNSSCPFCGASFVPFLNAEVCDLGPVSSVERNNWNVEDDVESAVRPPSVQEASLRQCN
GVSEDSSSETSSYSENSRTTTGSSVGGAPQVTVAYLSPLVVRKELESLLENEGEAVLAQP
QFLDNHSIIFWNLVWYFQRLGLPSNLLQLVRASPLVSHFTQSESSAVRVRLLWDTLSPDT
DQWPPLYVLWRIHSGVPMRIYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAVTLFLDTLDK
QPGSPRIQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLSSTLGRDELRNKRVQPPS
AKAVDCRRSFHPPLEC
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccccagctggtggactactttgtagtggccggtctggacccc
gggggccagtggaggcccctggatgaggatggaaaagcctcgtcctcgtcctcctcctca
tccccgtcctcgtcgtcctcgggctcgtcaggccgggcggtggagccggtcacagacctg
gtggtcatcgccaaggggctcggggaggaagtgcctgagggcttcacgtgcatcgagaag
acgctcggcggacactcggccgagctgagcgccggcctcatcaacaacccgcatctgtac
ctgtgctaccgccggggtcgagacaaaccgcccgtcctggacctcggggttctgtatgaa
gggaaggagcagctgaagcagggctggtacgtcatcgagacgacgccctacagccgctcg
gccagcctgagcgccggcggcggcccgaccgctcaccgggtgttcctgacgtatcgccgg
gctctggactcgcagggtctccacacgctgggcgtcaccgacatcgccctgctgctgccc
agcaagggggaggtggcgccgcacactttctctcgcgtcgaaaagaacctaaacaccggc
atgtggggtccaggcctgtacctgtgctacaagagagcggtggccaaagccaacgcgctg
gtctacgaagccagtctgatcagccgttaccctgaggaggacctggaggcattccctctg
ccagagtccgttccagtcttctgtttgccgatgggcgtcactgtggagagctggcctctg
aacacaaagtaccagctgcccgtcttctccaccttcgtcctcacgtccgcctccggggac
aaggtttacggtgccgccatccagttctacgagtccttccagagggagctgctgtcggag
cggcagagtgtgaggctgggtctgctcagcgtggtggaccggcggcccatcaccagccgc
agcctgcaggtgaagaagagcatctgtgtgttgtcacactggcccttcttcaacgtcttc
cagaagtttctcaccttcatctacagatactccatctccggacctcacgtgctgccacta
gagaaacacatatccagcttcatgcacaacgtcccgtttccttctccccagcgtcctcgc
atccttgttcagctgtctccatatgacaacctgctgctgtgtcagccggtctcctctcca
ctgccactcagtggtgcgagctacctgaagctgctacagaacctcggtccagaaaacgcc
tgcacgctgctgctcgccgtcctcaccgaacacaaactgctgctgcactcgctgcggccc
gacgtcctcacgtctgtcagcgaggcgctcatctctgtgagtttcccgctgcgctggctc
tgtccgtacatccctctgtgtccgctgcagatggccgacgtgctgctggcgccgatgcct
ttcgtcgttggtgtccactccagctactttgacctgtacgacccccccgcagacgtggtg
tgcgtcgacctggacaccaacaccatcttccagtcggatgaaaagaagccgttgtcatgg
cgatcgttgcccaggaggcccggcaaggcgctgttcaacactctcaccagcctccacaag
accctggagaagatttgcacacctggccaggaggaggcgacactggagttcctgctcacc
gactacgaccagatctaccggcgtcagaaacagctggagctggagatccaggaaggcttt
ctgcgtttcatgagctgcctgctgcgaggataccgctccttcctgctgcccattacacag
gcaccgtctgacaccaccactgactgcagttccctcttcaacctgcagggtttcctgaaa
tctcgcgatcggacgcagcagaagttttacaaccagctgacgagaacccagatgttcact
cagttcatcgaggagtgctccttcgtcagcgaccgccacgcctgcctcgagttcttcgac
gagtgcgtccagaaggtggacgtggagaagccggaggaggtgagattgatcgatctggac
gagactcacagcggagaacacaccgtcttcatcatgccgccagaggagccgcaggaagca
gacggctcagagtgtcccgccctctacagctatgagacgttccccactctgaggcccgag
ctctttgaccagccgcaggaccagctccgccccccggccaaaggcagcgcccccagtagc
cctgcccctcgacgcaccaaacaggagatcaagttggcgcagaagcgagcgcagaagtac
gcgtccgtcccggacatgtggtccaagtgtctgctgggtcactgttacggcctctggttc
atctacctgcccacgtttgtgcgcgccgagagcgccaaggtccgcaccctgcacacggcc
tacgacgtcctcaaacacatggagaacaggaaggtggtgctgccggacgaggtgtgttac
cggatcctgatgcagctgtgcggtcagtacgggcagccggtcctcgctgttcgagtcctg
ctggagatgaagaaggcgggaatcacgcccaacaccatcacctacggctactacaacaag
gcggtgctggagagcaagtggccctcaaccaatcagggcgggcgtctccgctgggccaag
ctgaggaacgtcctgctcgctgtggcccagtttagacggccgttaaagcggaagaagagc
ggctcggtggggtctcgaggagaagcgatgacagaacctgaccagaggctccacccccag
tccactctgattcgtcagtccagttggagcggtctgtctgaaagctccagtcacgagtcc
ctgactggtccactggtgaagagcaacagtctgagcagcatgaagacgtcgtctgacaag
gtgaaactctttaagaagacgatgcttcgcaacgccgggacagacagctgtggggaagcc
gtctcccgtaagccgccgctgggtcccagagacgcgtcggccacacctccagcgccccct
gttggtggtggtgtcctggtgaagcggagtcaggtttgcctctccaacttttacaaagag
tgtgcagagtctgccggctcggagccggactgcagctgtcagcctgcggagagagacgga
cggccagtgggtgtgcgtgacacggccggaagaaacaaggttgtagatgagaactacaac
aacgtgtcttccccgagcagaggtttggccgggaaactgcagcagctcctcactccgacc
agacaccgagtgtccgtgcgacgagccgccagcgtggacgaccggcggccgggaggagga
ggaggaggcgtcggacgaagagtgtctgagcagagacagtcgaggaaagctcaggtggct
gaaactctgctgaaggccaaagatcgactggtcaacgccacgtcagagagttcattgtct
gtaggaagtgacctcgacttgacggacacacccactgctgcgtttcctctgcgcaggtcc
tgggacgctaatcaggaggcggcaggactcgaggtgttgatatccagctgctctctgtgt
cgcagctgtaactcgttggtctatgacgaggagatcatggccggctggacgtcggacgac
tcaaacctgaactcgtcgtgtccgttctgcggcgcctccttcgtgcccttcctgaacgct
gaggtctgtgacctcgggccggtcagcagtgtagagcggaataactggaacgtggaggat
gacgtggagagcgcggtgaggccccccagtgttcaggaggcgtcactgcgtcagtgtaac
ggcgtcagcgaagactccagctctgagaccagcagctactctgagaacagcagaaccacc
acgggctcgtcagtgggcggggctcctcaggtgacagttgcgtacctgagccccctggtg
gtgaggaaggagctggagagtctcctggagaacgagggcgaggcggtgctggctcagcct
cagttcctcgacaaccactccatcatcttctggaacctggtgtggtacttccagcgcctc
ggcctccccagtaacctgctgcagctggtccgagcctcgccgctcgtcagccacttcacc
cagtcggagagctcggcggtgagggtgaggctgctgtgggacaccctgtcccccgacaca
gaccagtggcctcctctctacgtcctctggaggatccacagtggcgtcccgatgagaatc
tacagctggcggagacacaaccaccccttcacgttgtccttcctggaggaggtgctgcgc
tgggttggtatgaacgaggtgcacaaggccgtcacgctcttcctggacacgctggacaaa
cagccggggtcacctcgaatacagaggagtttgtacagagagttcctcttcctcacgctg
gctgcgatgggcaaagatcacgtcgctgcgttcgataagaagtataaggcggcgtactcg
cgcctcagcagcacgctcggccgcgacgagctgcggaacaagagagtgcagcctccgagc
gccaaagccgtcgactgcagacgcagcttccacccgccgctcgagtgctga
DBGET
integrated database retrieval system
