Solea senegalensis (Senegalese sole): 122775123
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Entry
122775123 CDS
T07721
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122775123 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122775123 (rorc)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122775123 (rorc)
Nuclear receptors [BR:
ssen03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122775123 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Spt20_SEP
VPS13_M
TFIIA
Motif
Other DBs
NCBI-GeneID:
122775123
NCBI-ProteinID:
XP_043890806
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Position
LG9:complement(18514811..18538107)
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AA seq
537 aa
AA seq
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MFSNACAGPGARTTNRVSQCSDKRVMDYEEADVSPADTPIIRRGGALSKKTHLTQIEVIP
CKICGDKSSGVHYGVITCEGCKGFFRRSQLPSVSYSCSRQSNCQIDRASRNRCQHCRLQK
CLAQGMSKDAVKFGRMSKSQRDSLIAEVAKHRQQQQQQQQQEQQQRQQLQGDAQSVLSFP
NKARQDRSSQLLQPMTPAYSFPGDAELLSYTADVHPYLVYSANESQGLIYRSSGISPTSR
SQSRGGNSGHPDIRGFESRQPPHDLMALHPYSSLEESYSIYSHSLRNIDELCASIVRSHR
ETSQYRVEELQALKWKLFSREEIQVYQSKSEDDMWQYCAIRLTDAVQYVVEFAKHIPGFR
TLSQNDQIALLKTGSMEVVLVRMSRSFNTENNTVFFDGKFAGIEVFKSLVCGDLITAVFD
FAHDMCTLKLTEQQIALFSALVLINADRPCLEDRSRVQRVQRGVVLGLTHILHRDNQESL
LNKLYQRMAVLRSLCLLHMQNLLWFSQRYPHTAHSLFPPLYKELFASEAELLPGTTH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatgcctgcgccggcccgggcgctagaaccaccaacagggtttcccagtgt
tctgataagagagtaatggactatgaagaggctgacgtgtcccccgctgacacccccatc
atcagaagaggaggagctttgtccaagaaaacacatctgacccagattgaagttattcca
tgcaagatctgcggtgataagtcgtcaggagtgcattatggagtcatcacgtgtgaaggc
tgcaagggatttttccggcgcagccagctgccctctgtgtcctactcctgctccaggcag
agtaactgtcagattgaccgggccagccgaaaccgctgccagcactgccgtctgcagaag
tgcttggcacagggcatgagcaaagacgctgtgaagtttggacggatgtccaaaagccag
cgcgactctctgattgctgaagtggcgaagcaccgtcagcagcagcagcagcagcagcag
caagagcagcagcagcggcagcagcttcagggagatgcccagtctgtgttgtccttcccc
aacaaagccagacaagaccgctcgtcccagctccttcagcccatgactccggcctattcc
ttccctggtgatgccgagctgctgtcctacactgctgatgtccatccttacctggtgtac
tctgcaaacgagtcgcaggggctgatctacagaagctccggcatctccccaacctccaga
tcccagagcaggggaggcaacagtggacaccctgacataagaggatttgagtcgaggcag
ccaccccatgatctgatggcgcttcatccctacagctctctggaggagtcttacagtatt
tattctcactctctgcgaaacatagatgagctttgtgccagcattgtgcgttcccaccga
gagaccagccagtacagagtggaggagctgcaggctctcaaatggaaactcttcagcaga
gaggagattcaggtctaccagagcaaatccgaagatgacatgtggcagtactgtgcgatt
agactgaccgatgccgtgcagtatgtggtggagtttgcaaaacacatcccaggtttccgc
acactcagccagaatgaccagattgccctgctgaagacaggctccatggaggtagttctg
gtcagaatgagtcgctctttcaacacagagaacaacacggttttctttgacgggaaattt
gctggaattgaagtgttcaagtctttggtgtgtggtgatttgatcacagcggtgtttgac
tttgctcatgacatgtgtacgctgaagctcacggagcagcagatcgctctcttcagtgct
ctggtgctgatcaacgcagaccgaccatgtctggaggacaggagcagggtccagcgggtg
caaagaggcgtggtgttaggactcacacacattctacaccgagacaaccaagaaagcctc
ttgaacaagctctaccagaggatggcagtgttgcgctcactatgccttcttcacatgcag
aatctgctttggttcagtcagcgttacccccacactgctcactccctgttccctccgctc
tacaaggagctgttcgcctctgaggcagagctgctgccagggaccactcactga
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