Solea senegalensis (Senegalese sole): 122775148
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Entry
122775148 CDS
T07721
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122775148 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122775148 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122775148 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
V-set
Tissue_fac
C2-set_3
Ig_CD22
Adeno_E3_CR1
AAA_31
Motif
Other DBs
NCBI-GeneID:
122775148
NCBI-ProteinID:
XP_043890863
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All DBs
Position
LG1:complement(28514279..28542690)
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AA seq
1594 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRRKEMESTLSQYQASSSSSSSRYMAGSSSSVSSRSRGLKVS
SHSGLEQSRLSPVPNRAKPTYLAVDKENQIIGYVVPIFRGSQEFVTGLSDTEEARVRDTA
AYMARRDLFTSGVEMERSQISRKEAMRESAERISLNKRLHEHEEHFKRMNEDSLMHAPEF
VIKPRSHTVWEKQCVRLHCTVTGWPEPRVVWYKNNVPIEPLANPGKYNLESKYSVHSLEI
NKCDFDDTAQYHASAMNSKGELSAFASIIVKRFKGEVDEYLPSPRRAVSQDGPVSEYGIN
FETHIVDRFGVSFGREGETMSLGCTVIIYPTLHRYQPEVQWYKDDVLLSPSKWYNMHWSG
DRATLTLTHLNKEDEGLYTLRVTTKSGYETYSAYIFVRDSDAEIEGAPGAPLDVRCLDVN
KDYIIVTWKQPAVDGGNSILGYFVDRCEVGTTHWIQCNDTPVKFARFPVTGLVEGRSYIF
RVRAVNKSGMSHPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGVVPGRPLE
LQVTEATKNYVVLSWKPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLA
EGKSYSFRVRCCNSAGVGEPSNPTEAFTVGDKLDIPSAPGKVVPTRNTDTSVVVSWEASR
DAKELVGYYIEGSIVGSHVWEPCNNKPVNVTRFICHGLMTGEKYVFRVRAVNAAGLSQFS
PESEPVEVKAAIASPAPPFGISVLECVHDSMVLAWKQPTFIGGADITGYFVDYREVIDGL
PGKWHEANIRAISERAYRVSDLKENMKYQFQVRAANMAGVGIPSLPSNTFLCEEWTIAVP
GPPHDLQIREVRSDSLSLLWKPPVYQGRDPVNGFYIDIKEAEAPEEAWRGVNNKATEKTF
MKIKNLKEGAVYVFRVRAQNKAGVGKTSDVTEPVPALTKPGTKEIVVDVDDDGVISLNFE
CCDLTPDSKFVWSKNYEDITDASRLTVETKGNKSKAVFNAPAEEDIGLYSCLVTHTDGAS
SSYDLSAEELKRLLVVSHEHKFPIIPLKSELAVEMLEKGKVRFWLQAEKISADAKVEYVF
NDNLISQGEKYKMNFDKSSGIIEMVMDSLTPADEGTFTFQLKDGKATNQSSLVLIGDVFK
ELQKESEFQRKEWFRKQGPHFIEYLSYELTPECCVVLKCKVGNVKKETSAVWYKDGREIK
SDEHLGFTEGVLKLEIAQCTCPADTAVGEKIGKTLKISKKDAGVYEVVLKDDRGKDTSTL
NLTDQGFKDLMNEVFSFIANSSTPLKITSTEKGIRLYTFVNFYTDLLQVTWHYKDSAISF
SERIKSGVVGEQLWLQITEPTEKDTGKYAIEFHDGKGGLRRTVELSGQAFDDAFAEFQRL
KAAAVAERGRARVAGGLPDVVTIQEGKALNLTCNISGDPSPEVTWLKNDREITSDDHIIL
KFESGKFASFTVTAVKTSDSGKYSILVKNKYGTESGDFTISVFIPDELESADLGVTSYWT
DTEGNVEFGPNTPKEEMKTLITGREKQRRKQSVAKSPTEGTEESTKTRRKSKEPEEQKNK
APPPAAAPAETKPSDSEQNEDAKEDLTNKSETHE
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctataccattctaccagaagcatcatcgccactatgaccgtggctaccgt
agaaaggagatggagtctacgttgagccagtaccaggccagcagcagcagcagcagcagc
agatacatggctggtagcagctcctctgtcagcagtaggagcagaggactgaaagtgtcc
tcacactctgggctggaacagagcagactgagtcctgtaccaaatagagcaaagccaact
tacttggctgtggacaaagaaaaccaaatcatcggttatgtagtgccgatcttcaggggc
agtcaagagtttgttacaggactttcagatacagaggaagcaagggtgagggacactgct
gcatacatggctcgcagggatttgttcaccagtggcgtggagatggagaggtcacagatc
tccaggaaggaggccatgcgcgagtcagctgagcgcatctctctgaacaaaaggctccat
gaacacgaggaacacttcaagcgcatgaacgaagacagcctgatgcacgccccggagttt
gtgattaaacctcgctcccacacagtgtgggagaagcagtgtgtgcggctgcactgcact
gttactggctggcccgagccccgggtcgtctggtacaaaaacaatgtgccaattgaaccc
cttgccaaccctggcaagtataaccttgagagcaaatacagcgtgcattcactggagatc
aacaaatgtgatttcgatgacacggcgcagtatcacgcctctgccatgaactccaaaggg
gagctctctgcgtttgcctctatcattgttaaacggttcaaaggggaagttgatgagtac
ctgccatcaccgaggcgggccgtttctcaagatggtccagtgtctgaatatggcatcaac
ttcgagacacacatcgtcgataggtttggtgtgtcatttggaagagagggggagaccatg
agtctggggtgcacagtcatcatctaccctactctgcatcgctaccagccagaggtgcag
tggtacaaagatgatgttctgctgtctccatccaaatggtataacatgcactggagcggc
gacagagccacactgacgctcacacacctcaacaaagaggacgagggtctctacactctg
cgcgtcaccaccaagtctggatatgaaacctactcggcctatatcttcgtcagagattct
gatgctgagattgaaggtgcaccaggtgctcccctggatgttcgctgtctggatgtcaac
aaggactacattatagtcacttggaagcagccagctgttgatggtggaaactccatcctg
ggctactttgtggacaggtgtgaggttggcaccactcattggatccagtgcaatgacact
ccagtcaagttcgcccgtttccctgtgaccggtctcgtggagggtcgctcttatattttc
cgcgtgcgtgccgtcaacaagagtggcatgagtcacccgtccagagtgtctgagcctgtg
gctgccatggacccagcagaccgcgcccgcatgagaggaacttctgccccctggaccgga
caaatcatcgtcacagaggaggagcctgcagagggcgttgttccaggcagaccccttgag
ctacaggttacagaagcaaccaagaactatgttgtcctgagttggaagccacctggggag
aaaggcctggagggagtcatgtactatgtggaaaagtgtgtctcaggcacagacagctgg
cagagagtgaacacggagatccctgtcaagtctcctcgtttcgcattgtttgatctcgct
gaagggaagtcctacagtttccgcgtcaggtgctgcaactctgccggtgtcggtgaaccc
tctaacccaactgaggccttcacagtcggtgacaagcttgatatcccatctgccccaggc
aaagtggttcccacgagaaacaccgacacgtcagtagttgtgtcttgggaggcgtcccgt
gacgccaaagagttggtgggatactacattgaagggagcatcgtgggcagccacgtgtgg
gagccgtgcaacaacaagccggtgaatgtaaccaggttcatctgccacgggctgatgaca
ggagagaagtacgtgttcagggtgagggcagtgaacgcagcagggctcagtcagttctca
ccggagtctgagcctgtggaggtgaaggctgctattgcctcccctgctccaccctttggc
atcagtgtgctggagtgtgtgcacgattccatggtcctggcctggaaacagccgaccttc
atcggcggcgctgacatcaccggctactttgtggattaccgtgaggtcatcgatggcctg
ccggggaaatggcacgaggccaacatcagggctatcagtgagagggcctacagagtgtcc
gacctgaaggagaacatgaagtaccagttccaggtgcgagctgccaacatggcaggtgtt
gggatcccgtcactgccgagtaacactttcctgtgtgaggagtggaccatcgctgtgcca
ggacctcctcatgacctgcagatcagagaggtgcgaagtgattctctgtcattgctatgg
aaaccacccgtgtaccagggccgcgatccagtcaacggcttctacattgacatcaaggaa
gctgaagcccccgaggaggcatggagaggagtcaacaacaaggcgacggagaagacgttc
atgaagattaagaatctgaaggaaggagcagtgtacgtgttccgtgtacgtgctcagaat
aaagccggtgttggtaaaacctctgacgtcacagagccagtcccagctctgaccaaacca
ggcaccaaggagatagtggtggatgtggacgacgacggcgttatctctctgaactttgaa
tgctgtgacctgacccctgactccaaatttgtttggtccaagaattatgaggatatcaca
gacgcatctcgcttgacagtagagacaaagggaaacaagtctaaagcggttttcaatgct
cctgcggaggaggacattggcctgtactcctgccttgtcacccacacggatggtgcttca
tccagctacgatctctctgcagaagagctgaagaggctactggtggtcagtcacgagcac
aaatttcccattattcccctgaagtcagagttggccgtggagatgctggagaaaggcaaa
gttcgcttctggctgcaggcggagaagatttcagccgatgccaaagtcgaatacgtgttc
aatgacaaccttatctctcagggggagaaatataagatgaacttcgacaagagtagtggc
atcattgagatggtcatggattctctgaccccggcggacgagggcaccttcactttccag
ctaaaagatgggaaagcgacaaaccagtccagcctggttctgataggagacgttttcaag
gagctacagaaggaatctgagtttcagagaaaagagtggttcagaaaacaaggtcctcac
tttatcgagtatttgagttacgagttgacaccagagtgttgtgtggtgctgaaatgcaag
gttggaaatgtgaagaaggaaacgtcagctgtgtggtacaaagacggacgtgagatcaaa
tcggacgagcatctgggcttcacagagggagtgttgaagctggaaatagctcagtgcacc
tgtcccgcagacacagcagtcggagagaaaatcgggaaaaccttaaaaatttccaagaaa
gacgctggagtgtatgaggttgttctgaaggacgacagaggaaaggacacgtccactttg
aatttgacagatcaaggtttcaaggatttgatgaatgaggttttcagtttcattgccaat
tcctccaccccactgaagatcaccagcacagaaaagggcatcagactctacacctttgtc
aacttctataccgatttactccaagtaacatggcactacaaggactcggccatctccttc
tctgagcgtataaagagcggtgtggtcggggagcagctgtggctgcagatcacagagccc
acagagaaagacacaggcaaatacgccatcgagttccacgacggaaagggcggcctgagg
agaaccgtggagttgtctggtcaagcatttgatgatgctttcgcagaattccagagactc
aaagctgctgctgttgcagagagaggtcgtgctcgagtcgcaggagggttgcctgacgtg
gtcaccatccaggagggcaaggctctcaatctcacctgcaacatttctggcgacccctcg
ccagaggtcacctggctaaagaacgacagggagatcacatcagacgatcacatcatcctg
aagttcgagtccggcaagttcgccagcttcaccgtcaccgccgtgaagacgtcggactcc
gggaaatacagcatcctggtgaagaacaagtacggtacagagagcggagacttcaccata
agtgtcttcatccctgatgagctggaaagcgctgatctcggggtcacctcgtactggaca
gacacagaggggaacgtagagttcggcccaaacaccccgaaggaagagatgaaaaccctg
atcactgggagggagaagcagagaaggaagcaatctgttgccaagtcacccactgaggga
acagaggagagcacaaagacgaggaggaagagtaaggagccagaggagcagaaaaataag
gctcctcctcctgctgctgctcctgcagaaacaaaaccttcagattcagaacaaaatgaa
gatgcaaaggaagatttgaccaacaaatcagaaactcatgagtag
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integrated database retrieval system