KEGG   Solea senegalensis (Senegalese sole): 122775209
Entry
122775209         CDS       T07721                                 
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122775209 (prpf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssen03041]
    122775209 (prpf3)
Spliceosome [BR:ssen03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    122775209 (prpf3)
SSDB
Motif
Pfam: PRP3 Prp3_C PWI DUF2729 DUF4011
Other DBs
NCBI-GeneID: 122775209
NCBI-ProteinID: XP_043890957
LinkDB
Position
LG9:19832726..19840089
AA seq 704 aa
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRSSRGNKGAGDKNRKRDLKDVFGDEVEKGAVREISEAGDGTAPKRKR
VPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSPVSATPSQM
EASTVSRLLGTSAAAAPGSGSSLAPSQAASFMNDAIEKARKAAELQARIQAQLSMKPGIL
GALGNTGPHNIVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRM
PTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVLIAPSQRPRKSFRFHEQGRFEKI
AQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGDGEVPHIEWWDSYILPSH
IDINTETKFDQMALFGVTNLVEHPAQINPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQ
KEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAA
RKLTAEQRKEKKIKKIKEDITDGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHK
DVNLVVVEGGPKSQKKFKRLMMHRIKWVEHNSKRDDPDGDDDTRRNNKCWLIWEGTSKER
SFVGDMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLETSDD
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtctctacctaaacgagaggtggaggagttaagaccatgggtggaacgcactgtgaag
aaagtgcttggtttttcagagcccactgtggtcactgcagctttacactgtgttgggaaa
ggactggacaaaaggaagacaacagaccagcttcgtcctttccttgatgaatctgccgga
ggttttgtggagcgtctttttgaagcactggaggagagccgcagttcccgtggtaacaaa
ggagcaggagacaagaaccgcaaaagagatcttaaggatgtgtttggtgatgaagtggag
aaaggtgcagtgcgagaaatatctgaagcaggagacggaacagcgcccaaacgtaaacgg
gtccctcgctttgaggaggtggaggagcctgaggtcatccctggacctccatctgagagc
cctggaatgcttaccaaaatgcagattaaacagatgatggaggctgccacaaaacaaatc
gaagagagaaagaaacaactcagctttagctctcctgtttctgccacaccgtcacaaatg
gaagcctcaacagtgtcacggcttcttggcacctcagctgctgcagcacctggtagtggc
tcatctcttgccccttcccaggctgccagctttatgaatgatgccatagagaaggcccgc
aaggctgctgagcttcaagcacgaatacaggcccagttgtccatgaaacctggaatcctg
ggagccttggggaacactggacctcacaacatagtggcactagctaatctacacgccatg
ggaattgctcctccaaaagtagagatcaaggaggtgaacaagccaactcctcttattctg
gatgataagggaagaactgtggatgcgagtggcaaagaggttgaacttacacaccgcatg
cccacgctgaaagctaacattcgagcggtaaagagggagcagttccgtcagcagctgaag
gagaagcctggggaggacttggagtccacctcctacttcgatcaacgtgtgcttatagca
ccatcccaacgccctcgcaagagcttccgtttccatgaacagggacgctttgagaagatt
gctcagagaattagaaccaaggcccaattggaaaggttacaaaatgagattgcccaggca
gcaaaaaagactggaatccaggcttccaccaagctagcgctgattgcccctaagaaggag
attggagacggggaggtgcctcacattgagtggtgggactcttatatcctgccctcccac
atagatataaacacagaaaccaaatttgatcagatggcgttgtttggtgtgaccaacctt
gtagaacatcctgcccaaattaaccctccagttgacacagataaaccagtcacgctgggg
gtgtacctgacaaagaaagaacagaagaagctgaggagacagacgcgaagggagggccaa
aaagaagtccaagagaaggttcgactgggactcatgcctccaccagaacctaaagtgcga
atctccaatttgatgagagtgctggggacagaagcagttcaggacccaacaaaggttgaa
gcccatgtcagagcacagatggccaagagacagaaggctcatgaagaggccaatgctgct
cgcaaactcacagcagagcagaggaaagagaagaagatcaaaaagataaaagaagacatc
acagatggtgttcatattgcagtgtacagaatccgtaacctgcaaaatcctgctaagaag
tttaaagtggaggccaatgctaatcagctgtatctgacgggcacagtagttctgcacaaa
gatgtcaacctagttgtagtggagggaggtcccaaatcccaaaaaaagtttaagaggctg
atgatgcacagaatcaaatgggtggaacacaatagtaaaagagatgatccagatggtgat
gatgatacaaggagaaacaacaaatgttggttgatttgggagggaacatccaaagagcgc
agttttgttggagacatgaagttcaagcagtgccccacagagaacatggccagagagcac
ttcaagaagcatggcactgaacattattgggacctagccctcagtcaaagcgtgttggag
acctcggatgactga

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