Solea senegalensis (Senegalese sole): 122775209
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Entry
122775209 CDS
T07721
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122775209 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122775209 (prpf3)
Spliceosome [BR:
ssen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122775209 (prpf3)
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF2729
DUF4011
Motif
Other DBs
NCBI-GeneID:
122775209
NCBI-ProteinID:
XP_043890957
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Position
LG9:19832726..19840089
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AA seq
704 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRSSRGNKGAGDKNRKRDLKDVFGDEVEKGAVREISEAGDGTAPKRKR
VPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSPVSATPSQM
EASTVSRLLGTSAAAAPGSGSSLAPSQAASFMNDAIEKARKAAELQARIQAQLSMKPGIL
GALGNTGPHNIVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRM
PTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVLIAPSQRPRKSFRFHEQGRFEKI
AQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGDGEVPHIEWWDSYILPSH
IDINTETKFDQMALFGVTNLVEHPAQINPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQ
KEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAA
RKLTAEQRKEKKIKKIKEDITDGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHK
DVNLVVVEGGPKSQKKFKRLMMHRIKWVEHNSKRDDPDGDDDTRRNNKCWLIWEGTSKER
SFVGDMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLETSDD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacctaaacgagaggtggaggagttaagaccatgggtggaacgcactgtgaag
aaagtgcttggtttttcagagcccactgtggtcactgcagctttacactgtgttgggaaa
ggactggacaaaaggaagacaacagaccagcttcgtcctttccttgatgaatctgccgga
ggttttgtggagcgtctttttgaagcactggaggagagccgcagttcccgtggtaacaaa
ggagcaggagacaagaaccgcaaaagagatcttaaggatgtgtttggtgatgaagtggag
aaaggtgcagtgcgagaaatatctgaagcaggagacggaacagcgcccaaacgtaaacgg
gtccctcgctttgaggaggtggaggagcctgaggtcatccctggacctccatctgagagc
cctggaatgcttaccaaaatgcagattaaacagatgatggaggctgccacaaaacaaatc
gaagagagaaagaaacaactcagctttagctctcctgtttctgccacaccgtcacaaatg
gaagcctcaacagtgtcacggcttcttggcacctcagctgctgcagcacctggtagtggc
tcatctcttgccccttcccaggctgccagctttatgaatgatgccatagagaaggcccgc
aaggctgctgagcttcaagcacgaatacaggcccagttgtccatgaaacctggaatcctg
ggagccttggggaacactggacctcacaacatagtggcactagctaatctacacgccatg
ggaattgctcctccaaaagtagagatcaaggaggtgaacaagccaactcctcttattctg
gatgataagggaagaactgtggatgcgagtggcaaagaggttgaacttacacaccgcatg
cccacgctgaaagctaacattcgagcggtaaagagggagcagttccgtcagcagctgaag
gagaagcctggggaggacttggagtccacctcctacttcgatcaacgtgtgcttatagca
ccatcccaacgccctcgcaagagcttccgtttccatgaacagggacgctttgagaagatt
gctcagagaattagaaccaaggcccaattggaaaggttacaaaatgagattgcccaggca
gcaaaaaagactggaatccaggcttccaccaagctagcgctgattgcccctaagaaggag
attggagacggggaggtgcctcacattgagtggtgggactcttatatcctgccctcccac
atagatataaacacagaaaccaaatttgatcagatggcgttgtttggtgtgaccaacctt
gtagaacatcctgcccaaattaaccctccagttgacacagataaaccagtcacgctgggg
gtgtacctgacaaagaaagaacagaagaagctgaggagacagacgcgaagggagggccaa
aaagaagtccaagagaaggttcgactgggactcatgcctccaccagaacctaaagtgcga
atctccaatttgatgagagtgctggggacagaagcagttcaggacccaacaaaggttgaa
gcccatgtcagagcacagatggccaagagacagaaggctcatgaagaggccaatgctgct
cgcaaactcacagcagagcagaggaaagagaagaagatcaaaaagataaaagaagacatc
acagatggtgttcatattgcagtgtacagaatccgtaacctgcaaaatcctgctaagaag
tttaaagtggaggccaatgctaatcagctgtatctgacgggcacagtagttctgcacaaa
gatgtcaacctagttgtagtggagggaggtcccaaatcccaaaaaaagtttaagaggctg
atgatgcacagaatcaaatgggtggaacacaatagtaaaagagatgatccagatggtgat
gatgatacaaggagaaacaacaaatgttggttgatttgggagggaacatccaaagagcgc
agttttgttggagacatgaagttcaagcagtgccccacagagaacatggccagagagcac
ttcaagaagcatggcactgaacattattgggacctagccctcagtcaaagcgtgttggag
acctcggatgactga
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