Solea senegalensis (Senegalese sole): 122775301
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Entry
122775301 CDS
T07721
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122775301
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122775301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
122775301
NCBI-ProteinID:
XP_043891090
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Position
LG9:23627781..23635691
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AA seq
593 aa
AA seq
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MDQVLPSRTSPSGLLEPDSEELQLRVDSFRKLGYSSEEVRSALRKVGLSTDTNSVLGELV
RSRTSTVPSSDGDERRTGPKDALLPPSWVHGSRITPQPGHQKNMEAELRPVVIDGSNVAM
SHGNKEVFSCRGIQLAVNYFLDRGHSTITVFVPSWRKEQPRPDAPITDQHILMELEKRKI
VVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERPEWKKCIEERLLMY
SFVNDKFMPPDDPLGRHGPSLDNFLRKKPLLTEQKRQLCPYDKKCTYGIKCKFYHPERVN
QSYLSLADELREKAQMSSSKEEKNARSSPRQVQIDTGPGPNASSHPRDSKADLSGDGQSS
CISRISENQMYWEDPRNGSNLMPLGLSSVPNHRYGNISHEYLDSGFGSFESQYSDHSHCL
GNSLRPTSQQQPVHLGKNDSSHSCRGCSHAAPSTAHPQRHRNLDYPPMFPPSVPQQHSLP
SHLHYSGALHPQQNYWSDPFQGIPQSKTSCHLPSSHSHNSCSCSYRGHEYHSWGQQQPSS
AVFDPERMELRKKLQAIFNPHQVDTVMEMFPHLMDAEKLAANILNLKAQGGIF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggtacttcccagccggacctcaccttcaggcctgctggaaccagacagtgag
gagctccagctcagagtggactccttcaggaaactgggttattcttcagaggaggtcagg
tctgctctgaggaaggtggggctcagcacggacaccaactcagtgctcggagagctggtg
aggagcaggaccagcactgtgcccagctctgatggtgacgagaggagaacaggaccaaag
gatgctctcttgcctcccagctgggtccatggatccagaatcacaccgcaaccgggtcac
caaaagaacatggaagcagaattgaggcctgtggttattgacggcagcaatgttgccatg
agtcatggcaacaaggaagtgttctcctgccgaggaatccagctggcagtgaattacttc
ctggaccgaggtcatagtaccattactgtgtttgttccgtcttggcgcaaagagcagccc
agacctgacgcccccatcacagatcaacacattctcatggagctggaaaagcgtaaaatc
gtggtcttcactccctcgcgccgagtcgggggtaagagggtggtttgctacgatgaccgc
ttcattgtcaagctggcatacgagtcggacggagtgattgtatctaacgacacctatcgg
gacctccaaggagaaagacccgagtggaagaaatgcatagaggagagactcctcatgtac
tcctttgtgaatgacaagttcatgcccccagatgaccctctgggtcgccacggccccagt
cttgacaacttcctcaggaaaaagcctctgcttacagagcagaagcgacagctctgtcca
tatgacaaaaagtgcacatatggcatcaaatgcaagttttaccatccggagcgagtaaac
cagtcctacctctctttggctgatgaactgagagagaaagcccagatgtcttcgtcaaaa
gaagagaagaatgccagatcatcacccagacaggttcagattgatactgggcctggtcct
aatgcaagttcccatccccgagactcgaaagcagatctcagtggtgatgggcaaagttct
tgcattagtcgcattagtgaaaatcaaatgtactgggaggacccaagaaacggttcaaat
ctcatgccattaggtctgtcatcagtgcccaatcatcgctatggcaacatctctcatgag
tacctggattctggctttggctcttttgagagccagtactctgatcactcacactgtctc
ggcaactccctcaggcccacgtcccagcagcaacctgtgcatttagggaaaaatgacagc
agccactcgtgtagaggctgttcccatgcagctccctcaacagctcacccacaacgacac
agaaacctggactatcctcccatgttcccaccaagcgtgccacaacaacacagtctcccc
agccatctccactatagtggagccctccatcctcagcaaaattactggtcagatcccttc
caggggattccccaatccaagacatcatgtcatctcccatcttcacactcccacaactcc
tgctcttgctcctacagaggccatgagtaccactcctggggccaacagcagccatcttct
gctgttttcgacccagaaaggatggagctccgcaagaaactgcaagccattttcaacccg
catcaggtggacacggtgatggagatgttcccacatctgatggatgcggagaaactggcc
gcaaacattctgaacctgaaggcgcagggaggaatattctga
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