Solea senegalensis (Senegalese sole): 122775491
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Entry
122775491 CDS
T07721
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
122775491 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122775491 (rag1)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122775491 (rag1)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122775491 (rag1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RAG1
zf-RING_10
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
U-box
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122775491
NCBI-ProteinID:
XP_043891312
LinkDB
All DBs
Position
LG10:complement(18882211..18888963)
Genome browser
AA seq
1070 aa
AA seq
DB search
MVEEQLETDGPRSSMPAELPHPQSQYSQWKFKLFRVRSMEKAPLPTESQPEGEVLLRISP
TAAPQIELDNAVGPGSVMKLCLGGKKENVEGPGGRIDRKLEEMDTHMNHLRCLCRLCGMT
LRKVKGPVHEVHRDLDEGTKGVLRKMGCKFTGWPEVILKVFKVDVTEDTESVHPISFCHR
CWMASIRGGGVCSFSRTRVPEWKPHSSLCHLCFPKKHSFKRTGRKRRKSIPRVQSLAKRS
RWEHITNIHVGERRFWKPFGDHEHGPALRGWGKPSIQREQWVRNITQCQKDHLSTKLISE
KLPVDFLYSFTCLVCDHLLSDPLQSPCGHLFCRSCILKYNHALGPHCPACNLPCAPNDLT
PPAKAFLSALYSLPLLCPRGDCGEHVRLESFKTHYLDHEQRQTDPNKLSSQLDNYLFANK
GGRPRQHLLSLTRRAQKHRLRDVKNHVRVFADKEEGGDLKSVCLTLFLLALRSGNEHRQA
DELEALMQGRGFGLHPAVCLAIRVNTFLSCSQYHKLYRTVKAISGRQIFQPLYTLRAAEK
ELLPGFHQFEWQPALKNVSPSCNVGIINGLSGWASSVDDYPADTIARRFRYDVALVSALK
DLEEDIMEGLRESGMEDSACTSGFRVMIKECCDGMGDVSEKHGGGPAVPEKTVRFSFTIM
SVSVRPDDEEKEVTIFTESKPNSELSCKPLCLIFVDESDHETLTALLGPIVAERNAMKES
RLILSMGGMPHFFSFHFRGTGYDEKMVREMEGLEASGSTYVCTLCDSSRAEACQNMVLHS
ITRSHEENLDRYEIWRTNPFSESLDELRDRVKGVTAKPFMETQPTLDALHCDIGNATEFY
KIFQDEIGEMYQKVNPSREERRSWRAALDKQLRKKMKLKPIMRMNGNYARRLMSMEAVEV
VCELVPSEERREALRELMRIYLQMKPVWRTTCPAKECPDQLCSYSFNSQRFADLLSSVFK
YRYNGKITNYLHKTLAHVPEIVERDGSIGAWASEGNESANKLFRRFRKMNARQSKTFELE
DVLKHHWLYTSKYLQKFMEAHKDSARAMQATINPVEMQGDEEMSLEVTDL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggagcagctggagacagatggccccagatcctccatgccagcagagctcccc
catccccagtctcagtactctcagtggaagtttaaactgtttagggtgaggtccatggag
aaggctccattgcccactgagtcacagcctgagggagaagtcttgctaaggatctcacct
actgcagctccacaaatagagttagataatgccgtggggccagggagtgttatgaaattg
tgccttggcggaaaaaaggagaatgtggaaggcccaggtggaaggatcgataggaagcta
gaggaaatggacacacacatgaaccacctcaggtgtctgtgtcgtctttgtggaatgact
ttgaggaaagtgaaggggcctgtgcatgaagtacacagggatctggatgagggcactaaa
ggtgtcttgcgtaaaatgggctgcaaattcacaggctggccagaagtcatcctcaaagtc
ttcaaagtggacgtgacagaggacacagaatcagtccacccaatttccttctgccatcgc
tgctggatggcttccatacgaggtgggggtgtctgcagtttctccagaacaagagttcct
gagtggaaaccccactcttccctctgccacctttgcttccccaagaaacattcattcaag
cgaactggaaggaagaggaggaagagcattcctagagtccagagcctggcaaaaagaagc
aggtgggagcacatcaccaacattcatgttggcgagcgaagattttggaaaccatttgga
gatcatgaacacggtcctgcactcagaggctgggggaaacccagcatccagagagagcaa
tgggtaaggaacatcacccaatgccagaaagaccacctgagtacgaagctgatctctgag
aagctccctgtggacttcctgtactctttcacctgcctggtgtgtgaccacctgctctct
gatccacttcagtccccctgtgggcacctcttctgccgcagctgcattttaaaatataac
catgctctgggaccccactgcccagcgtgcaacttgccctgtgcccccaacgatctcact
ccacccgcaaaagcctttttatcagcgctgtattctctgcctctgctttgccccagaggt
gactgcggtgagcatgtgaggctggagtcatttaaaacccactatctggatcatgagcag
agacaaacggacccaaacaagctgtcatcacagcttgataactacctgtttgccaataaa
gggggcagaccccgtcagcacttgctgtcactgacccgtcgtgcccagaaacatcgactg
agggatgtgaagaaccacgtgagggtgtttgcagacaaagaggaaggtggcgatctgaag
tctgtgtgcctgaccctcttcctgcttgctctaagatctggaaatgaacaccggcaggca
gatgagcttgaggccctgatgcaaggcagaggtttcgggcttcatcctgcagtgtgcttg
gccattcgagtgaacactttcctgagctgcagccagtatcacaagctgtaccggaccgtc
aaagctatcagcggccgccagatttttcagcccctttataccctccgagctgcagagaag
gagcttctccctggctttcaccagtttgaatggcagccagctctgaaaaatgtgtctcca
tcttgcaatgttggcattattaatgggttgtcaggatgggcttcctcagtagatgactac
ccagccgataccatcgctcggaggtttcgctatgatgtggcactggtgtccgcattaaag
gatctggaggaggacatcatggaggggctgagagagagtgggatggaagacagtgcttgc
acctcaggctttcgtgtcatgatcaaagaatgttgtgatggtatgggcgatgtcagcgag
aagcacggtggaggaccggctgttcctgagaagactgtacgtttctctttcactataatg
tctgtctcagtgcgacctgatgatgaggagaaggaggtaacaatcttcactgagtcaaag
ccaaactcagaactgtcttgtaagcccctatgcttgatttttgtagatgagtcagaccat
gagacactaacagctctcctggggcccatagttgcggagcgtaatgcaatgaaagagagc
aggctcatcctatccatgggcggtatgcctcactttttcagcttccacttcagaggcaca
ggatatgatgagaagatggtacgagaaatggaaggactggaggcatcgggatccacatat
gtctgcactttgtgtgactcaagtcgggcagaagcatgtcaaaacatggtgctgcactcc
atcacacgttctcatgaagagaacctagaccgttatgaaatatggagaaccaaccctttc
tctgagtctctagatgagctgcgagacagagtcaaaggggtcacagccaaacccttcatg
gagacccagcccacacttgatgcgttgcactgtgatattggcaatgccactgagttctac
aaaatcttccaggatgagataggggagatgtaccaaaaggtcaaccccagccgggaggaa
cgccgcagctggagagcagccctggataaacaactgaggaagaagatgaagctcaaacca
ataatgaggatgaatggaaactatgcccgcaggctaatgtccatggaggctgtggaggtg
gtgtgtgagctggtgccatcagaggagaggagggaggccctcagagagcttatgagaatc
tacctccagatgaagcccgtgtggcgcacaacctgcccggcaaaggaatgccccgaccag
ctgtgcagctacagcttcaactcccagcgctttgccgacctcctctcctctgtcttcaaa
tacaggtacaatggaaagataaccaactaccttcacaagaccctggcacacgtgcctgaa
atcgttgagagagatggatccatcggcgcctgggccagtgaggggaatgagtcagcaaac
aagttgttcaggcgttttaggaaaatgaatgcacgtcagtctaagacctttgagctggag
gatgtgctgaaacatcattggctctacacctccaagtacttgcagaagtttatggaggct
cacaaagattctgccagagctatgcaagctaccatcaacccagtagagatgcagggagat
gaggaaatgtctctggaagtgactgacttgtga
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