Solea senegalensis (Senegalese sole): 122775549
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Entry
122775549 CDS
T07721
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122775549 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122775549 (myo5c)
04131 Membrane trafficking [BR:
ssen04131
]
122775549 (myo5c)
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122775549 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122775549 (myo5c)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122775549 (myo5c)
mRNA cycle factors
P-body specific factors
122775549 (myo5c)
Membrane trafficking [BR:
ssen04131
]
Others
Actin-binding proteins
Myosins
122775549 (myo5c)
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122775549 (myo5c)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122775549 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
TcaA_5th
AAA_22
AAA_16
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122775549
NCBI-ProteinID:
XP_043891444
LinkDB
All DBs
Position
LG10:complement(14199325..14211034)
Genome browser
AA seq
1744 aa
AA seq
DB search
MTLLELYTKYNRVWIPDEEHVWKSAEIVRDFHVGDNVLELLLEDCTEQRYPVDPLKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPVTEAIGNAKTTRNDNSSRFGKFTEISFDRKYQIIGANMR
TYLLEKSRVVFQAENERNYHIFYQLCSCAHLPEFKNLRLLSADNFRYTSMGGDVTIEGVD
DKKDMEETRQTFSLLGLKEDFQSDVFKVLAAVLHLGNVEIGDSGKDKSSSSVSLSDPHLA
VVCELLGVSAEELVHWLCHRRIVLLAETVVKPMPKERAVNARDALAKHIYAHLFDCIIIR
INKALQVPGKQHAFSGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYM
KEDIPWTLIDFYDNQPVIDLIEAKMGILDLLNEECLFPQGTDQTWLQKLDTYLISSTLFE
RPRLYGEAFVIQHFADKVEYQCKGFLEKNRDTLYEELVDTMRVSKFPFLANFFQEEEPSA
VSSKGVKVRPARPAVKPTNKQLRTSVGDKFSSSLSLLMETLNSTIPHYVRCIKPNDEKIP
FEYDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMTHQEPDLNDKKQTCK
NVLQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACITVQKHVRGWSQRRKYLR
MREAAIILQQYIRGKRTIRKMVSAATLKQGWAALVIQRHWKGYRTRQIYQLVRLASVTIQ
AFTRGWMARKRYKKMMEEQKALVLQKYARAWLARRRFQTMRRLVLNVQLSFRVQQLRKKI
EDQNKENRGMVDKLTSLANTHSQTVDRLQVMEAQLEKSNSQRATLETREKKVKEDATLTV
AQYQKELDSLKLEKRNLEKKFEAAIKEAEESFEVLRRNILDEKENEARLRKIAENNNEIQ
RHDSEKEVEALKEEIKKLKEERVILHRKVEEEGRVNADLQEQVIQLTKHVKTIPELRREM
NNLQNQRNNMDRKMKQQSEQARAKMNEITIQLLGGVVEEEVLLGLSSNDSEKIYDMEDLL
AAFDGLQKATRILEKHQKEQKESYETQLEGLLLKVDHLQHENGRLQSLFQEKSNVNDSIR
QEVSRLNSENLLIPELKVQVSELQRQKQELQVNVEERNKELAEKTEAITSVHQIKIKEES
SLRRHFEDKAEELEEVKRELQGRVEDLEEENDHLKQQQLLESEAKIKLRFEISQLTAETM
EFEEQLDHKDRFIKKLQNQIKSLETSQKAKQKPAPIIPKDYLGMLEYKKEDEPRLIQNII
LDLKPKGVVVNMIPSLPAYLLFMCVRYADYLNDEAKLKALMNAIISAVKKVIMNHYKDFE
LLSFWLSNTCLLLNCLKQYSGEEEFMKLNTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQ
FITVMEKALTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETYTISSIIQQLTHF
HSTMNQHGMDQGLIKQAVKQLFFLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLK
EKELQNSNAMDTLRPLSQAAWLLQVNKSTDDDAKEITEKCTELNSVQVVKILNSYTPIDD
FEKRVTSSFVRKVQSLLQDREGSTQLMLDTDYRFQVMFPFCPSSQALELLQVPNSLNLGF
LTRI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgactctgttggaactgtacaccaagtacaacagagtgtggattccagatgaagaacat
gtgtggaaatcagctgagatcgtgagagattttcacgtcggagataatgttcttgaactg
ctccttgaagattgcacagagcaacgttatcccgttgaccctttgaaaccacaactccct
cctctgcgcaacccagacatcttggttggggagaatgacctcactgctctcagttacctc
cacgaacctgccgtgctgcataatctcaaagtgcgatttgtcgagtccagaatcatctat
acctactgtggtattatactggtggcagtaaatccctacaaacagctccctatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaagaggcttacaaacagatggctagaaaccacaagaaccaatctataatt
gtcagcggtgaatcaggagctggtaaaacggtgtctgctcgatatgccatgaggtacttt
gctgttgtaagcaaatctggcagcaagacccgagtcgaagacaaagtcctagcatccaat
ccagtaacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgattt
gggaaattcacagagatcagctttgacagaaagtaccagatcattggagcgaacatgagg
acctacctcttagagaaatccagagtagtttttcaggctgaaaatgagaggaattatcac
attttttaccagctgtgttcttgtgctcacctgccagagttcaagaacctcagattgttg
agtgcagataacttcaggtatacgtccatgggtggtgatgtcactattgaaggtgtagat
gacaagaaagacatggaagagactcgacagaccttctcactgctggggctgaaggaggac
tttcagtcagatgtcttcaaagttttggccgcagttcttcatttgggaaacgtggagatt
ggagactctggaaaggacaaatcatcatcatcagttagtctcagtgatccacacctggca
gttgtctgtgagttgctgggtgtgagtgcagaggagttggtgcactggttgtgccaccgg
aggattgttctgttagccgagacagtggtgaagcctatgcccaaggagcgggcagtaaat
gccagagatgcccttgccaaacatatctatgcacatctttttgactgtattattatcaga
ataaacaaagcgctgcaggtccctggaaagcaacacgctttttcaggcgttctggacatt
tatggctttgaaacatttgacatcaatagctttgaacagttttgtatcaactatgcaaat
gaaaagcttcaacagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatg
aaggaggacatcccatggactctgatagatttctatgacaaccagccagtcattgacctg
attgaagcaaagatggggattcttgacttgctgaatgaagaatgtttgtttcctcagggc
actgatcaaacctggctgcaaaagttggacacctacctcatctccagtactctgtttgag
aggccacggttatacggcgaggctttcgtaatacaacactttgcagacaaggtggagtat
cagtgcaaagggtttcttgaaaagaacagagacactctgtatgaagaactggtagacact
atgagagtcagtaagtttccatttctggccaactttttccaagaggaggagccaagcgct
gtgagcagtaaaggtgtcaaagtgaggccggccagacctgcagttaaaccgaccaataaa
cagctgagaacctctgtgggagataagttttccagctccctctccttactgatggaaaca
ctgaattctaccatcccacactatgtgcgctgcatcaagccaaacgatgaaaagattcca
tttgaatatgactccaggagggtcgtgcagcagctacgagcctgtggagtccttgaaaca
attcgaattagtgcacaaagctatccatccagatggacatacattgagttttacagccgt
tacagtattctaatgacacatcaggagccagatctcaatgacaagaagcagacctgcaaa
aatgtgctgcagaggttgatccaggactccaaccagtacaagtttggacggacaaagatc
ttctttcgagccggacaggtagcttatctagagaagctccgtctggaccgacttcgaggg
gcttgcataaccgtccagaaacacgtccgcgggtggagccagcgcaggaagtacctgcgc
atgagagaggcagccatcatcctccaacagtacatccgtggaaagaggacaatccgtaaa
atggtgagtgctgcaacactgaagcagggttgggcagcactggtgatccaaagacactgg
aaaggttaccgcacgagacagatctaccagttagtccgtctggcttctgtcaccatccag
gctttcacacggggttggatggcccgaaaacggtacaagaagatgatggaagagcaaaaa
gccctggttctccagaagtatgccagagcatggctggctcgaaggagatttcaaaccatg
cgtcgcctggtgcttaatgttcagctttcattccgagtgcagcagctcagaaagaagatt
gaagatcagaataaagagaaccgggggatggtagacaaactgaccagcttggccaacacc
cactctcaaactgtggacagacttcaggtcatggaggcacaactggaaaaatcaaacagc
cagagggcaactttagagacaagagagaagaaagtgaaagaggatgcgactctgacagtt
gcacagtatcaaaaggagttagattcactaaaacttgaaaagaggaacttggagaaaaag
tttgaagcagccatcaaagaggcagaagagagttttgaagtcctaaggagaaatattctt
gacgagaaagaaaatgaagcaaggctaagaaagattgctgagaacaacaatgaaatccag
agacacgacagtgagaaggaggtggaagctctgaaagaggaaataaaaaagttgaaagag
gagagagtcattctacacagaaaagtagaggaggaaggtcgagtgaacgctgacctccag
gagcaagtcatccagctcaccaagcacgtcaagactataccggagctacgcagagagatg
aataaccttcaaaatcagaggaataacatggacagaaagatgaagcaacagtcagaacaa
gcaagagcaaagatgaacgagattacaatacaacttcttggtggtgttgttgaagaggag
gttcttttggggctttcttcaaatgactctgagaagatttatgacatggaagatttgctg
gcagcctttgacgggttgcagaaagcaaccagaatactggaaaagcaccagaaggagcag
aaggaaagttacgagacccagctggagggcttgcttttgaaagtggaccaccttcaacat
gagaacggcaggctgcagagcctgttccaggagaaaagtaacgtcaatgacagtattcgc
caagaagtgtccagactcaacagtgagaacttgctgataccagagctgaaagtgcaggtt
tcagagctgcagagacagaaacaagaattgcaggtcaatgtggaggaacggaacaaagag
ctagcagaaaaaactgaggcgatcaccagtgtccatcaaataaagattaaagaagaaagc
tcattgcgcagacactttgaggacaaagctgaggagttggaggaggtgaagagggaactt
caaggccgcgtagaggatctggaagaggagaacgaccacttgaagcaacagcagctgttg
gagagtgaagccaagatcaaactgagatttgaaatttcacagttaactgcagagaccatg
gaatttgaagagcagcttgaccataaagacagattcattaagaagctccagaatcaaatt
aagagccttgagacgtcacagaaagccaagcaaaagcctgcacccattattcctaaagat
tacctcggcatgttggagtacaaaaaagaggacgaacccaggctcatccaaaacatcatt
ttggacctgaagcccaagggtgtggtggtgaatatgattccgagtcttccagcctacctc
ctcttcatgtgtgtccgctatgctgactacctgaatgatgaggccaaacttaaggcttta
atgaatgcaatcatcagtgctgtcaaaaaggtcatcatgaatcactacaaagactttgag
ttgctgtccttctggctctcaaacacgtgtctcctgctcaactgtctgaagcagtacagc
ggggaggaggagttcatgaagctaaatactccccgccaaaagaagaactgcttgcagaat
tttgacttgtcagaacacagacagattctcagtgacctggccatccacatctaccatcag
tttatcacagtcatggaaaaggccctcactcctgcgatcgtgccaggcatgttggaacat
gagagtttacaggggatttccagcatgaagccgacaggcttcaggaaacgttccaacagc
atctatgaggactcagagacctacaccatctcttccatcattcagcagctcactcatttc
cactccaccatgaaccaacatggcatggatcagggcctcatcaaacaggctgtcaagcaa
ctgttcttcctcgtgggtgcaacgaccctcaacaacatcatgctgcgcaaagatatgtgt
tcctgcaggaagggaatgcaaatcaggtgtaacatcagttacctggaggagtggctgaag
gagaaggaactgcagaactctaacgcgatggatactctgaggccactgtctcaggctgcc
tggttactgcaagtcaacaagtccacagatgacgatgccaaggagatcactgaaaaatgc
actgagctcaactctgttcaggttgtcaagattttgaactcatacacaccaatagatgat
tttgagaaaagggtgacgtcatcgtttgtccggaaagttcagtcattactccaggatcgt
gaagggtccacgcagctgatgctagacacagattatcgtttccaggtcatgtttcccttc
tgcccgtcctcgcaggctctggagcttctgcaggtcccaaacagtctgaatctgggcttt
ctgaccaggatctga
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integrated database retrieval system
