Solea senegalensis (Senegalese sole): 122775681
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Entry
122775681 CDS
T07721
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122775681 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122775681 (sf3b3)
03041 Spliceosome [BR:
ssen03041
]
122775681 (sf3b3)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122775681 (sf3b3)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122775681 (sf3b3)
Spliceosome [BR:
ssen03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122775681 (sf3b3)
Complex B
122775681 (sf3b3)
Complex C
U2 SnRNP specific factors
122775681 (sf3b3)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122775681 (sf3b3)
TFTC complex
122775681 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
122775681
NCBI-ProteinID:
XP_043891700
LinkDB
All DBs
Position
LG10:complement(2585562..2609984)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKTMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQCTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGAGQWASIVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DEWYVLVGVARDMILNPRSVSGGFIYTYRLTSGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGIGKLLRIYDMGKKKLLRKCENKHVPTLVTGIHTIGQRVIVTDVQESLFWIRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSLAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcacactacagcgagccactggcatcacccatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcttggaactg
ctgcgtccagatgccaacacaggaaaggtgcacactctgctcacagtagaagtgtttggc
atcgtaaggtctctgatggctttcaggctcaccggtggaaccaaagattacatagttgta
ggaagtgacagtggtcgcattgtcatcctggaatatcatccatcaaagaacatgtttgag
aagatccaccaggaaacatttggaaagagcggttgtcggcgcatcgttcccggacaattc
ctggctgttgatccaaaaggcagagctgttatgataggagcgatcgagaaacagaagctg
gtttacattctgaacagagacgctgcagcgagactgaccatctcctccccactggaggcc
cataaagcaaacacactggtttaccacgtggtcggagttgacgttggctttgagaatccc
atgttcgcctgcttagaaatggactatgaggaagctgacaatgacccaacaggagaagct
gctgccaacacacaacagactctcaccttctacgagctggatctcggcctaaatcacgtg
gtccgcaaatacagtgaggctttggaagagcatgggaatttccttatcacagttccgggt
ggctcagacgggcccagtggtgtcctgatctgctctgaaaactacatcacctacaagaac
tttggagaccagccagacattcgctgtcccatcccgcgacgcaggaatgacctggacgac
ccggagcggggcatgatatttgtctgctcggccacacacaagaccaagaccatgttcttt
ttcctggctcagactgagcagggagatatcttcaaggttaccctggaaacagatgaagaa
atggtcacggaaatcaggctgaagtactttgacacgatccccgtagcaacagccatgtgt
gttctgaagactggcttcctgtttgtgtcttcagagtttggaaaccactacctttaccag
atcgctcacttgggtgacgacgatgaggagcctgagttctcatctgcgatgccactggag
gaaggagacaccttcttcttccagccccgcccactcaaaaatttagtgctggtggatgaa
caggagaacttatcccccatcatgtcctgtcagattgctgatctggccaacgaggacaca
cctcagctgtacgtagcctgtggacgaggacccaggtctacactaagggtccttcgtcac
ggactggaggtttcagagatggctgtgtccgagctgcccggtaaccccaacgctgtgtgg
acagtacgcagacacgtggaagacgagtttgatgcctatatcattgtgtctttcgtcaac
gccactctggtcctgtccatcggcgagactgtagaagaagtgacggattccgggttcctg
ggaacaacacccactctttcctgctcgttgctgggtgaagatgccttggtgcaggtttac
ccagacggcatccgtcacatccgtgcagacaagcgtgttaacgagtggaagactccaggt
aaaaagaccatcgtccgctgtgctgtgaaccagcggcaggtggtcatcgccctcactgga
ggggagctggtctactttgaaatggacccgtctggccagctgaacgagtacacggaacgc
aaggagatgtctgcagatgtggtttgcatgagcctggccaacgtccctcccggcgagcaa
cgctcccgattcctggctgttggactggtcgataacaccgtccgaatcatctccctggat
ccatcggactgcctgcagcccctgagtatgcaggctctaccagcccaaccagagagtttg
tgtatcgtagagatgggaggggtcgagaagcaagacgaacttggagaaaagggaaccatc
ggtttcctctacctcaacatcgggcttcagaatggtgtgctgttgaggaccgttttggac
ccagtaaccggcgacctgtcggatacaagaacacgttaccttggatcgcggcctgtcaaa
ctcttcagagtcaggatgcagggccaagaagcagttctggcgatgtccagtcgctcttgg
ttgagctactcgtatcagtctcgcttccacctgactcctctatcatatgagactctggaa
tatgcttctggctttgcctctgagcagtgcccagagggtatagtagccatttccaccaac
acactgagaatcttggctttggagaagttgggcgccgtcttcaaccaagtggcctttccc
ctgcagtgcactcccaggaaatttgtaattcaccccgagaccaataacctaattttgatc
gagacagaccacaatgcttacacggaggcaacgaaagctcagcggaagcaacagatggct
gaggaaatggtggaggctgctggtgaggatgaaagagaactggctgctgaaatggccgcc
gccttcctcaacgagaatctcccagaagccatctttggctccccaaaagctggagccgga
cagtgggcctcaatcgtgcgactggtcaaccccattcagggttcaactctggaccaggtg
cagctggagcagaatgaagctgcgttcagtgttgccgtgtgtcgatttccaaacacagga
gatgaatggtatgttctggtcggcgttgccagagacatgattctcaaccccagatcagtt
tccggtggctttatctacacctacaggctcaccagtggtggagagaagctggagtttgtg
cacaagaccccagtggaagacgtgcctctggccattgctccatttcagggacgagtcctg
gtgggaattggaaaactgctgagaatctatgacatgggaaaaaagaagctgctccgcaag
tgcgaaaacaagcacgtgcccaccctggtcactggcatccacaccatcggccaacgcgtc
atcgtgaccgacgtccaggagagtctgttctggatccgttaccggcgcaacgagaaccag
ctcatcatctttgcggatgacacgtatcctcgctgggtgacgaccgcctgcctcctcgac
tacgacaccatggcatctgccgacaagtttggcaacattagcatcgtgcgtcttcccccc
aacaccagcgatgatgtggatgaagatcccaccgggaacaaagctttatgggacagaggc
ctcctgaatggagcatcacagaaggctgaggtgatagtgaattatcacgttggtgagacg
gtgctgtctctccagaaaaccacactgattcccggaggctcagagtccctggtctacacc
acactgtctggaggcattggcattttagttccattcacgtcacacgaggatcacgacttt
ttccagcatttagagatgcacatgcgctcggagttccctccactgtgtggcagagaccat
ctcagcttcagatcctattacttcccagtcaagaacgtgatagatggagatctgtgcgag
cagttcaacagcatggaccctcacaagcagaagagcttggcagaagagctggacaggacg
ccacccgaggtctccaagaagctagaggacattcgcactcgctacgccttctaa
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integrated database retrieval system
