Solea senegalensis (Senegalese sole): 122775708
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Entry
122775708 CDS
T07721
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04620
Toll-like receptor signaling pathway
ssen04621
NOD-like receptor signaling pathway
ssen04622
RIG-I-like receptor signaling pathway
ssen04623
Cytosolic DNA-sensing pathway
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122775708 (irf7)
04621 NOD-like receptor signaling pathway
122775708 (irf7)
04622 RIG-I-like receptor signaling pathway
122775708 (irf7)
04623 Cytosolic DNA-sensing pathway
122775708 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122775708 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122775708 (irf7)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122775708 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
122775708
NCBI-ProteinID:
XP_043891752
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Position
LG10:19487482..19491553
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AA seq
428 aa
AA seq
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MQSLQKPQFANWLIKQVETGQYTGLCYVGENKFRVPWKHNSRRDCRDEDSKIFRAWAVAS
GKISEFPNDKARWKTNFRCALNNLSVRFKMVQDNSKNSIDPHKIYEIINTEYRHESLPKQ
ASRPDSPMTLDIYSSPTEYFPMGQEQNLVNYFTALGIEKRPTEAQLWVENQAVLGSYPAV
GENLPQVIPDQPSYCEVNPQPVLHSVVESSIQPSINDLEISIYYRKMEMFKTTLNTVRLQ
LHYQHEAPELNAHHLCFPSTDGLLDHKQIEYTNRILNSIQRGLLLEVQETGIYAWRQDRC
HVFASTSDPSVAHPDPRKLPQNTMVELLSFEKYINDLKKFKENNGGSPDYTINMCFGEKF
PDGKPLEKKLIIVKVVPLICRYFHEMAQMEGASSLHSTNVSLQMSHNSLYDLISSVFSLP
TVDASFLH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccttcaaaagcctcagtttgccaactggctcataaagcaggtggagacaggc
cagtacacgggtctgtgctacgtgggcgagaacaagttccgagtcccttggaagcacaac
tccagaagggactgcagagacgaggacagcaaaatattccgggcatgggcagttgcgagt
ggcaaaatcagcgagttccccaacgacaaggccaggtggaagaccaacttccgctgcgct
ctcaacaacctgtccgtgcgcttcaagatggtgcaggacaattccaagaactccatcgac
cctcacaaaatctacgaaatcatcaacactgagtacagacatgaaagtcttccaaaacaa
gcgtcacgtcctgattctcctatgaccctggacatctacagctctcccacagagtacttc
cccatgggacaggagcaaaatctggttaactatttcacagctttgggtatcgaaaagcga
ccaacagaggctcaactgtgggtggagaatcaggctgttcttggaagttatcctgctgtg
ggcgagaacctcccacaggttattccagatcagccgtcttactgtgaagtgaatcctcaa
ccagtccttcattcagtcgtcgagtcatcgatacagccaagtatcaacgacctggagatc
tccatctactacaggaaaatggaaatgtttaagaccacgttgaacactgtccgtctccag
ctccactaccagcacgaagcccccgagctcaatgcccatcacctgtgcttcccctcaact
gacggccttctagaccacaaacagattgagtacaccaaccgcatcctgaacagcatccag
agaggtttactcctggaggtccaggagaccggtatctatgcctggaggcaggacaggtgc
catgtgttcgccagcaccagtgaccccagtgttgctcacccagacccaagaaagcttccg
cagaacaccatggtagagctcctcagttttgagaagtatataaacgacctgaaaaagttt
aaggagaacaacggtggctctcctgactacaccatcaacatgtgctttggagagaagttt
cccgacggaaaacccttagagaagaaactcatcatcgtcaaggtagttcctctgatctgt
cgatactttcacgagatggcgcagatggaaggcgcttcgtcactccacagcaccaacgtc
agtctacagatgtcacacaacagcctctatgatctcatcagctctgtgttcagtctgcca
acagtcgatgcatcttttctacattag
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