Solea senegalensis (Senegalese sole): 122775743
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Entry
122775743 CDS
T07721
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04150
mTOR signaling pathway
ssen04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122775743 (lrp5)
04150 mTOR signaling pathway
122775743 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122775743 (lrp5)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122775743 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
122775743
NCBI-ProteinID:
XP_043891801
LinkDB
All DBs
Position
LG10:complement(4348818..4400619)
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AA seq
1650 aa
AA seq
DB search
MDLKRRGREMGDLLLALLLLTSSLVSAAHGSPLLLFANRRDIRLVDAESVRGESAIVVGD
LEDAAAVDFLYSEGLIFWTDVSEEAIKQTHWNQSSNSLKEALGTGKTVVVSGLDSPDGLA
CDWLGKKLYWTDSETNRIEVANLNGTSRKVLFWMDLDQPRAVALNPAQRYMYWTDWGEEP
RIERAGMDGSNRKVIVNQDIYWPNGLTIDLLEDKLYWADAKLSFIHRANLDGSARETVVE
GTLTHPFALTLSEDTLYWTDWQTRSIHACNKNSGDKTREILSGIYSPMDIQVLETYRQPY
FQTPCSDNNGGCSHLCLLSPVNPFYSCACPTGVQLNPDGKTCKPGAEQVLLLARRTDLRR
ISLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAMVLATSE
INHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISEDLNEPRAIVLDPVNGFMY
WTDWGENPKIERANLDGTDRLVLINSSLGWPNGLALDYAAGKLYWGDAKTDKIEVINVDG
SNRQTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKGTAVREIIIDQLPDLMGLKAT
KVTETHGTNGCAVDNGGCSHLCFWRRQTVSCACPMGMELLSDLQTCVVPEAFLLFTNRDN
IRSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIE
FGLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLENPRSLDNPRSMAL
DPANGYMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDHRLYWTDLDTCMI
ESTNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGQNRTVVLKGQLE
LMLDILVFHSSRQDGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNCSSPSSF
LLFSQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGA
MSMIVSSTSQAVDSQLQLHDLSLDPYSRHIYWTCETTNTINVQRMDGHTVGVVLKDDTDK
PRALVVSAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFW
VDADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQQMIEMVDKLTGDGR
TRIQGRISYLTSIHAVEEMDPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQ
DLLRCGEPPTCSTEQFTCSTGEIDCIPMAWRCDRFPECEDGSDEENCPVCSAFQFQCDKG
GCIDAQRRCNGEPDCADNSDEQDCETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDEL
ACEYVSPPSSGIPNTGTNTIVPVIAIILLVFLIGGAYFICQRVVCRRYKGPSGTFPHEYI
SGTPHVPLNFIAPSSSQHGTFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSS
SSTKGAFYPQILNPPPSPATDHSLYNTEIFYSSNSPSTTRSYRPYHPVRGAAPPTTPCST
DVCDSDYTPHHLPAGVASSAGRWKAVSHSSHGKQNKYYMDLNSDSDPYPPPPTPRSQYLS
AEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagcgcagaggacgtgaaatgggtgatctgctgctggcgctgttactgctg
acgagttcactggtgtcggcggctcacggctcacctctccttctctttgccaaccggcgg
gacatacgtttggtggatgcagagagtgtgcggggtgagtcggccattgttgtcggtgac
ctggaggatgcagcagcagtggacttcctgtattcggagggccttatattctggaccgat
gtcagtgaggaggccatcaagcagacccactggaaccagtcatccaactcccttaaagag
gcactgggaactggcaagactgtggtagtatcagggctggacagtcctgatggcctggcc
tgtgactggttgggtaaaaagctttactggacagactcagagaccaatcggattgaagtg
gccaacctcaacggaacctccaggaaagtcctgttttggatggacttggaccagcccaga
gctgttgctctcaaccctgcacaacgctacatgtactggactgactggggggaggagccc
aggatagagcgtgctggcatggatggcagcaacaggaaagtgatcgtaaaccaggacatt
tactggcccaatggtctgacaatagacctgttggaagataagctgtactgggcagatgct
aaactcagcttcattcacagagccaacctcgacggatcagcacgtgaaacggtggtggaa
ggcaccctcacccatccttttgcactgacactgtctgaggacacattatactggactgac
tggcaaacccgctccatccatgcctgtaacaaaaacagtggagacaaaaccagagagata
ctcagtgggatttactctcctatggacatccaggttctggagacctatcgacaaccttac
ttccagactccatgcagtgacaataacggaggctgcagtcatctctgcctactctctcca
gtcaaccctttctacagctgtgcctgtcccactggtgtccagctaaacccagatggaaag
acctgcaaaccaggagcagagcaagtcttgctgctggcaagacggactgacctgaggaga
atctcactggacctgccagatttcactgacattgtgctacaggttgatgacattcgccat
gccattgccatagactatgacccggttgagggttatgtctattggacagatgatgaggtg
cgcgccattcggcgatcccacattgatggcagtaatgccatggtgctggccacctcagag
atcaatcaccctgatggcattgctgtggactgggtggcaaggaacctgtactggactgat
actggcactgaccgcattgaggttacgaggctgaatggaacctcccggaaaatcttgatt
tctgaggacttgaatgaacccagagccattgtcctggaccctgttaatggtttcatgtac
tggactgactggggtgagaatcccaagatcgagcgagccaacctggatggaacagaccgg
ctggttttgatcaacagctctctgggctggcccaacggactggcactggattatgcagca
ggaaagctttattggggggatgctaaaacggacaagatagaggtgatcaatgtggatggc
agtaacagacagactctgctggaggacaagctgcctcacatctttggcttcactctgctg
ggtgattacatctactggactgactggcagagacgcagcattgagagggtccacaaaggc
acagcggtacgagagatcatcattgatcagctgccagacttaatggggctgaaggccact
aaagtgaccgagacacacggtacaaatggctgtgcggtggataatggtgggtgcagccac
ttgtgtttctggcgtcgacagaccgtcagctgtgcctgtcccatgggcatggagctgctc
tctgacctgcagacctgtgtggtacctgaagctttcctgctgttcaccaacagggacaac
atcagaagtatatctttgggtacaaacagcaacgacgtggccattcctctaacaggagtc
aaagaggcctcggctctcgactttgatgtctctgagagaagaatatactggacggacata
caggccaagacaatcagcagagcgtatatgaacggcagctcagtagaacatgtcatagag
tttggactggattacccagagggcatggcagttgactggatgggtagaaacatatactgg
gctgatacgggcactaaccgcatcgaggtggccaggctggacggccagtatcgacaggtt
ctggtctgtaaggatcttgagaacccgcgctcactggacaaccctcgctcaatggcactg
gacccagctaatggctacatgtactggacagagtggggtggccgacctcgtatagccaga
gcatatatggatggcagcaccatcacgaccctggtggataaggtgggacgggccaatggg
ctgaccattgactatgtagatcatcgactctactggacggacttggacacatgcatgatc
gaaagcaccaacatgcaaggccttcagagggagatcatagtggacgacctccctcacccc
tttggtctgacacagtaccgagattttatctactggactgacttcaatctgcgcagcatt
gagcgggcagataaacgcagtggacaaaaccgcactgttgtgctgaagggccagttggag
ctgatgctggacatcctggtgttccactcctcccgccaggatggtactaacgaatgctcc
cataataacggcaactgtgcccacctctgcctggccacgcctgctggtgcccagtgccgc
tgtgcctcccattacaccctgaaccccgatggacgaaactgtagctctccctctagtttc
ctactcttcagtcaaaaggccagtatcagcaggatggttctgggagagcagagtcctgat
ataattctgcccatccatgtcctgagaaacgtccgagccgtcagctacgacccgttagac
cggcttgtctactggctggacggacgacagaacattcgcagggccagagacgatggagcc
atgtccatgatagtgagcagcacttctcaggcagtggacagccagcttcagcttcacgac
ctgagcctggacccctacagccgccacatatactggacctgtgagacaacaaacactata
aatgtccagaggatggacggacacaccgtgggtgtggtcctgaaggatgacactgacaag
ccccgggcccttgtggtcagtgctgagaaagggtacatgtatttcactacagtgcaggag
cgctcggctaaaatcgaaggtgccagtttggacgggacagaaagagaatctctgttcacc
accggtctgatcagacccgtcgcactggctctggacaataaattgggaaaactgttctgg
gttgacgctgaccttaaacgcatagagagcagtgatctgacaggagccaatcgcattgtc
ctccaggattccaacattttacagccaatgggcctgacagttctgggagatcatctgtac
tggattgaccggcagcagcagatgatagagatggtggacaagctgacaggagacggacgg
acgcgcatacagggaaggatatcatacctgacctccattcacgctgtagaagagatggac
ccacaggagtttgcctcccatccctgttcccgagacaacggcggctgttctcatatctgc
atcgcaaagggtgacggtacacctcgctgctcctgtccgatgcacctggtgttactgcag
gacctgctgcgctgtggagagcctcccacctgctccacagagcagttcacctgctccact
ggtgagatcgactgtattcctatggcgtggcgttgtgaccgcttccctgaatgcgaagat
ggcagtgacgaggagaactgccccgtctgctcagccttccagttccagtgcgacaaagga
ggctgcatcgacgctcagaggcgctgcaacggcgagccagactgtgccgacaactctgat
gagcaggactgtgaaaccatctgccctcctaaccagttccgctgcggcgacaaccagtgt
atcacgaagaaacaacagtgtgacaactactctgactgtccagacggatcggatgagctt
gcctgtgaatatgtgtcccctccatccagtggcatcccaaacacagggaccaacaccata
gttccagtcattgccatcatcctgctggtctttctgatcggtggagcttatttcatttgc
caacgtgtggtgtgtcggcgctacaagggccccagtgggacgtttcctcacgagtatatt
agcggtacaccccatgtaccgctaaacttcattgcccccagtagctcgcagcacggcacc
ttccaagggatttcctgtgggaagtccataatgagctcagtcagcctgatgggcagcagc
agcagcggagctccactctatgacaggaaccatgtgacgggagcttcatccagcagctcg
tcatctaccaagggagccttctacccccagatcctgaaccctcctccgtccccagccact
gaccactctctctacaacacagagatcttctactcctccaacagtccatccaccaccaga
tcatacagaccctaccacccagtccgcggtgcagcaccgcccactacaccctgcagcacc
gacgtctgtgacagcgactacacgccccaccacctccctgccggtgtggcatcgtcagcc
ggccgctggaaggctgtgagccacagcagccacggcaaacagaacaagtactacatggac
ctgaactctgactctgacccctaccctccacccccaactccccgttcccagtacctgtca
gctgaggagagctgtcccccatccccctccacagagcgctcctacttccacctgtgtccc
cctcctccctcaccctgcaccgactcctcgtga
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integrated database retrieval system
