Solea senegalensis (Senegalese sole): 122775817
Help
Entry
122775817 CDS
T07721
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
ssen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122775817 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
122775817 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122775817 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122775817 (gtf2h1)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122775817 (gtf2h1)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122775817 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
122775817
NCBI-ProteinID:
XP_043891941
LinkDB
All DBs
Position
LG10:complement(14011678..14017162)
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKVQLQLVLHTGESTTFHFANESSAVRDREAAKELLQQLLPKFKKKANKELEEKNRMLQD
DPVLFQLYKDLVVSQVISAEEFWANRLGGINNTDPALCNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVIQGVKNPLVDLLSLEDKTLDEGYGVSTSLPSTSSANRTLKES
SNSAIIKRFNHHSAMVLAAGSRKGETATDQASETSSTDGNSRDSDFFQPPVKKVKLQEAT
EYDDLQRENRPKTVPLNLKKSDRYAHGPVPLQSQQYATSQDIINSVNYIRHEMANYKPNL
TQVLSSTAASSAIAALSPGGVLMQAGAQQAINQMIPTEVQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQMSKLRPFQEKIQRQYLSTNLTGHLEDMLQTAYNKFHV
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcattgtcagaggaggtgctgctggttgtgaaaaaagttcgccagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtccagagggcaaggaccgc
ttcacagtcagccacctctatgcagatattcgctgtcagaagatcagcccagatggtaaa
gccaaagttcagctccagcttgtcctccacaccggagagagcaccacattccactttgcc
aatgagagtagtgcagtcagagacagagaagctgccaaggaactgctgcagcagctactg
cccaagttcaagaagaaagccaacaaggaactagaggagaaaaacagaatgcttcaagat
gatccagtacttttccagttgtataaagatctcgtggtgagccaggtgatcagtgctgag
gaattctgggccaacaggttagggggcataaacaacacagaccctgcactatgcaacaac
aaacaggaagtcggtatttctggagcctttctggcagacattagaccccagacagatggt
tgcaatggcttgagatataatctgacagcggacattattgaatccatctttagaacatat
cctgcagtgaagcagaagtatagtgaaaatgtgcctcataacctgacggagaaggaattc
tggacccgctttttccagtcccattactttcacagagaccgcatcaacacaggaacacag
gatatcttctcagagtgtgccaagcaggatgagaaggggttaaagtcgatggtgattcaa
ggagtgaagaatcctttggttgacctcctgtcattagaagacaaaacattagatgagggt
tatggagtttccacaagtcttccctcaacttccagtgcaaacagaacgttgaaggagagc
agcaactctgccattataaagcgcttcaaccatcacagtgccatggtgctggcagcaggt
tcacgcaagggcgaaacagcaactgaccaagctagtgagaccagcagcaccgatggcaac
tctagagattcagacttctttcaacctcctgtaaaaaaggttaaattacaagaagcgaca
gaatatgatgatctccagagggaaaacagaccaaaaacagtcccactgaacctcaagaag
tctgacagatatgctcatggtcctgtgccacttcagtcccagcagtatgcaacaagtcag
gatatcatcaattctgtcaactacatccgccatgagatggccaattacaaacccaacctc
actcaggtgttgtccagcacagcggccagttctgctatagcagcactttctccaggcggt
gtcctcatgcaggcaggagcacagcaagccataaatcagatgatacccactgaggttcaa
ggagaattgaagcatctttatgtagctgctggagagttattgagacacttctggtcctgt
tttcctgtaaacacgccgtttttagaggaaaaggtaatgaaaatgaagtcaaacctcgag
agatttcagatgagcaagcttcgtccttttcaggagaagattcagcgccagtatttaagt
acaaatctcactgggcacttagaggacatgctgcaaacggcctacaacaagttccatgtc
tggcaaacccgtcggatgatgaggaaaacctga
DBGET
integrated database retrieval system
