Solea senegalensis (Senegalese sole): 122775833
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Entry
122775833 CDS
T07721
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122775833 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122775833 (roraa)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122775833 (roraa)
Nuclear receptors [BR:
ssen03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122775833 (roraa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122775833
NCBI-ProteinID:
XP_043891965
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Position
LG10:12986696..13025807
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AA seq
468 aa
AA seq
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MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFAPSSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQAFLQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHL
SEDEIALFSAFVLMSADRSWLQEKLKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVEG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatttcagctatgaaagctcaaatcgaaataattccctgcaagatc
tgtggagacaaatcatcaggcatccattacggcgtgataacatgtgaaggctgtaagggc
ttcttcaggaggagtcagcagagcaatgcagcctactcctgcccccgtcagaagaactgc
ctgattgaccgcaccagccgcaaccgctgccagcactgccggctgcagaagtgcttggca
gtgggcatgtcacgagatgcggtgaagtttggccgcatgtcgaagaagcagcgagacagc
ctgtatgctgaggtccagaagcaccggctgcagcagcaacagcgtgaccaccaacaacag
cctggggaggcagagccgctcacacctagctacggcctctcagccaatggcctcacagag
ctccacgatgacctcagtggctacatggacggtcacacccctgacggcagcaaaccggac
tctgcagtcagcagcttctacctggacatccagccatctcccgaccagtcaggcctggac
atcaacggcatcaagccggagcccatctgcgactttgcccccagctctggcttcttccct
tactgctccttcaccaatggagaaacctcacccacagtgtccatggctgaactagagcac
ctggcccagaacatctccaagtcacacatggagacatgtcagtacctgagagaggagctg
cagcagatgacctggcaggcctttctgcaggaggaggtggagagctaccagagcaagcca
cgggaagtcatgtggcagctgtgtgctatcaaaataacagaggccattcagtatgtggtg
gagttcgccaagcgcatcgacggcttcatggagctgtgtcagaacgatcagatagtgctg
ctgaaagcaggctctttggaagttgtatttgtcagaatgtgccgtgcctttgactcgcaa
aacaacacagtctattttgatggaaaatatgctggacctgatgtgttcaagtcattaggc
tgtgacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttctatgcacctg
tctgaggatgagatcgccctgttctccgcctttgtgttgatgtctgctgaccggtcttgg
ctccaggagaagttgaaggtggagaaactccagcagaagatccaactggccctccagcat
gtcctgcagaagaaccacagagaggacggtatactaacaaagttgatatgcaaagtgtcg
acactgcgagcactgtgcagtaggcatacagagaagcttacagctttcaaagcaatatac
ccagacattgtgcgtgcccacttccctcccttatacaaggagttgtttggatcagacttt
gagcagtccatgcccgttgaagggtag
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