Solea senegalensis (Senegalese sole): 122775838
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Entry
122775838 CDS
T07721
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122775838 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122775838 (sin3aa)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122775838 (sin3aa)
REST complex
122775838 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122775838 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF768
Tox-MPTase3
Motif
Other DBs
NCBI-GeneID:
122775838
NCBI-ProteinID:
XP_043891973
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All DBs
Position
LG10:complement(9597938..9614910)
Genome browser
AA seq
1273 aa
AA seq
DB search
MKRRLEDQETVFASQQRRLTGNVEAFQHRVLAPAPAPAVYEAVPDNMQPTAGVQYSVPQG
YQVPTVSQNSGGHGHTPSPAVHGGSHHHNPAVQSHGPSVMSGHSHTAAPQASAQGQQQFQ
RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLI
MGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPLTGAATQHQPQLPSAPT
TTASPLLTQPTPAKMTKPLQPQALTPSIQSSPSIPGHTSPRSPPMQLHPPLSGTPTGPPM
QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ
EVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLNKTTAEKVESVRNDHGGTAKKLQLNNK
QRPNQNGCQIRRHPTPGSTPPVKKKSKLLNLKDPSMAEVGKHGVGTESLFFEKVRKALRS
AEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHIEAYPKE
RATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDST
FVSSKKTQYEEHIYRCEDERFELDVVLETNLSTIRVLETVQRKLSRMSAEEQAKFRLDNT
LGGSSEVVHRKAVQRIYGDKAPDIIDGLKKNPSVSVPIVLKRLKTKEEEWREAQRGFNKI
WREQNEKYYLKSLDHQGIHFKQNDTKVLRSKSLLNEIESIYDEHQEQASEENTTPPAGPH
LTLAYEDSQILEDAAALIIHHVKRQTSIHKEEKFKIKQIIFHFIPDMLFSQRGELSDVEE
EEEEEEMELEEGASKKHNGVPSSGSPSKSKLLFSNTAAQKLRGCDDAYNLFYVNNNWYIF
LRLHQTLCSRLLKLYGQAERQIEEDVRERDWEREVLGLKREKNDNPAIQLRLKEPMDIEV
EDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDE
ICVQVMDLFLAENSTGASGGSMSTQSSRNSAEAIYQRKAEQLMSDENCFKVMFLRNRGQV
HLMVELLDTEEENSDEPMEAERWSDYVERYLNPDSTTPELREHLAQKPVFLPRNLRRIRK
YQKGREQLDKEACEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHE
RVSTRLHKRFQAWVDTWVKEHVTRDMNAETNKWLMGEGREGLLPCTTARQPEIVHFVNIN
KYRVKYGTPSKSP
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgactggaggatcaggaaacggtttttgcatctcagcagcggcgcctcact
ggtaacgtggaggctttccagcatcgcgttctagcccctgctccggctccagctgtgtat
gaggctgtgccagacaacatgcagcccacggcaggcgttcagtactccgtcccacaggga
taccaggttcccactgtgtcccagaacagtggtggacatgggcacaccccgagcccagcc
gtccatggtgggtcccatcatcacaacccagcagtccaatctcacgggccctcagtgatg
tcaggacacagtcatacagctgctcctcaggcctctgcacagggtcagcagcagtttcaa
aggctcaaggtggaagatgctttgtcttacttggaccaagtaaaattgcagtttggcaac
cagcctcaggtctacaatgacttcttggatataatgaaagagttcaagtctcaaagtatt
gacactccaggggtcatcaaccgtgtgtcacagttgttcaaaggtcatcctgacctcatc
atgggcttcaacactttcctgccaccaggctacaagattgaggtccagaccaatgatttg
gtcaatgtgacaacacccggtcagattcaccatatcactcctcatggcatttcagtgcag
aacatccccttaacaggagcagctacccaacaccaaccgcagctcccatctgcaccaacc
accactgcttcccctcttttaacacagcctacccctgccaaaatgaccaaacctctccag
ccccaggccttgacaccgagcatccagagcagtccgtccatacctgggcacacctctccc
cgctccccacccatgcagctccacccccctctcagtgggacccccactggaccacccatg
cagaacaaccagcctgtggagttcaaccacgctatcaactacgtcaacaaaatcaagaat
cgcttccagggccagcctgacatttacaaagccttcctggagatactccacacctaccag
aaagagcagcgtaatgctaaggaggcaggagggaactacacaccggctctgacggagcag
gaggtgtatgctcaggtggccaggctcttcaaaaatcaagaggacctgctgtccgaattt
ggacaatttctgcctgacgccaacagttcagtgctgttaaataagaccacagctgagaag
gtagagtctgtacggaacgaccacggtggaactgcgaaaaagctgcagctcaacaacaaa
cagaggcccaatcagaacggctgccagatccgacgccatccaactccagggtccacacca
cctgttaagaagaagtccaagttactgaatttgaaagatccgtcaatggcagaagttggc
aagcatggagttggcacagaatctctgttctttgagaaggtgcgcaaagccttgcgaagt
gcagaggcctacgacaacttcctgcggtgtctggtcatctttaatcaagaggtaatctcc
agggctgaactggtgcagctggtgctgccctttttaggtaaatttcccgaactcttcaac
tggtttaagaatttcctgggatatcgggaaatgtcccacattgaggcatatcctaaggaa
cgggccactgagggcatcgccatggagattgattatgcttcctgtaagagactaggctcc
agttacagagctctgcccaaaagctaccagcagcccaaatgcactgggagaactccgctt
tgtaaagaggtcttaaatgacacctgggtgtccttcccctcctggtctgaggactccacc
tttgtcagctcaaagaaaactcagtatgaggagcatatttacagatgtgaggatgaacgc
tttgagttggatgtagtactggaaaccaacttgtccaccatcagagtattggagaccgta
cagcgtaaattgtctcgcatgtcagctgaggagcaggccaagttccgtttggacaacacg
ctgggcggctcctcggaggtcgtgcaccgcaaggccgtccagaggatatatggagacaaa
gcaccggacatcatcgatggcctgaagaaaaacccttcagtttctgtccccattgtgttg
aagaggttaaagacaaaggaggaagagtggcgggaagcgcaacggggcttcaacaagata
tggagggagcagaatgagaagtattacctcaaatctcttgaccatcaaggcatccacttc
aaacagaatgacaccaaagtgcttcgatccaagtccttactgaatgaaatagaaagcatc
tatgatgagcaccaggagcaggcttctgaggaaaacaccaccccacccgcaggtccccac
ctcacactggcctacgaagacagtcagatactggaggatgctgcagcactcattatccac
catgtcaagcggcagacaagcattcataaggaggaaaaattcaaaatcaaacaaatcatc
ttccacttcatccccgacatgctgttctcgcagcgtggtgagctttctgacgtagaggag
gaagaggaggaagaggagatggagctggaggaaggagcatccaaaaagcacaatggcgtc
cccagcagtgggagcccctctaaatccaagttgctgttcagcaacacggcggcacagaag
ctgcgcggctgcgacgacgcctacaacctcttctacgtcaacaacaactggtacatcttc
ctgcgactgcaccagacgctgtgctcgcgactgctgaagctgtacgggcaggcggagcga
cagatcgaagaggacgtcagagaacgcgactgggagagggaagtccttggactcaagagg
gagaagaacgacaatccagccatccagctgagactgaaggagcccatggacattgaggtg
gaagattactactcggccttcttggagatggttaggaatctgctggatggaaacatggag
gcctctcagtacgaggactcgctgagggagatgttcaccatccacgcttacatcgctttc
acgatggacaagctcatccaaagcatcgtccgacagcttcaacacatcgtgagcgatgag
atctgtgtccaagtaatggacctcttcctggcagagaactctactggggccagtggagga
tccatgtccactcagtcttcgaggaattctgccgaggctatctaccagcggaaagccgag
cagcttatgtctgatgaaaactgcttcaaggtgatgtttttgagaaacagaggtcaagtg
catctcatggtggagctcctggacacggaagaggagaactctgacgagcccatggaggca
gagcgttggtcggattatgtcgaacgctacttaaacccagattcaaccacacctgagtta
agggagcatcttgctcagaaaccagtttttcttcccaggaatctgagacggatcagaaag
taccagaagggccgagagcagctggacaaggaggcgtgcgagggcggcaagaagtccctg
gaaaaagagaaaatggagtgcatgttcaagctcaactcttacaagatggtatacgtcttc
aagtctgaggattacatgtacagacgcactgcactgctgagagctcaccagtcacatgag
agggtgagcacacggctgcacaaacgcttccaggcttgggtggacacgtgggtcaaggag
catgtcacccgcgacatgaacgccgagaccaacaagtggttgatgggtgaagggcgtgaa
ggattactaccttgcaccaccgctcgccagcccgagatcgtacacttcgtgaacatcaac
aagtaccgtgtcaaatacggaacaccaagcaagtcaccgtag
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