Solea senegalensis (Senegalese sole): 122775949
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Entry
122775949 CDS
T07721
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122775949 (lingo1a)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122775949 (lingo1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
122775949
NCBI-ProteinID:
XP_043892142
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Position
LG10:10397648..10496678
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AA seq
615 aa
AA seq
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MVAREATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCYRKKLMTVPE
GIPADTRVLDLSKNRIRTINPDEFANFLNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRNLNINVIRDYSFKRLYRLKVLEIA
NWPFLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLNTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPAETGTNDTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVEAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagagaagcaactgggcacagctacctggtggcctgctggcagcccattctg
atcctgatgctgggcactgtgctttctggctccaccacaggttgtccatcccgctgtgag
tgtaatgttcaagagcgctctgtgatgtgctaccgcaagaaactcatgacagttcctgag
ggcattcctgcagacacaagagtgctcgatctcagcaagaaccgcattagaaccatcaac
ccagacgagtttgccaactttctcaaccttgaacacctggagctcagtgaaaacacgatt
tccactattgaacctggagcgttcaacaatctgtacggcttgcggaccttggggctgcgt
agcaacaaacttaagttaatccagctcggtgtcttcacaggcctaagtaatctcacacag
ctggacataagtgaaaacaaaattgtcattctgttggactatatgttccaggacctgtac
aacctccgatctttagaggtgggtgataatgacctggttttcatctcccaccgggctttt
catggactaagtagccttgagcacctgagtctagagaagtgcaacttgtcctctgtgccg
acagaggcttttacccacctccacagtttgatcactctcaggctgcgcaacctcaatatc
aatgtgatacgggattactcctttaaacgtctttataggctgaaagtgctggaaatagca
aattggccatttttggatacgatgaccccaaattgcttgtatggattgaatctgacctct
ctgaccattgcaaatgccaacctgaccacgattccatacgtagccctgcggcatctggtt
tacttgcgctttcttaatctttcctataaccccatccataccattgaggggaataagctc
cacgatcttctgcgtctgcaggaatttcatttggtgggaggcagactggctatgattgag
ccctactctttccgtggcctaaactacctgaagattttaaatgtctctgggaactctctg
aacactttggaggagtcagcgttccattcagttggcaacctggaaacccttgccttgtat
gataatcccctggcctgtgattgcagactgttatgggtatttagacgacgctggcgactg
aactttaacaggcagcagcccacctgtgcctccccagagtttgtccaaggtaaagaattc
aaagacttcccagatgttctgcagcctaactacttcacatgtcgcaaatctaggattagg
gatcgcaaaccccagcagaagtttgtggatgagggagccattgttcacttcgcttgccaa
gcagatggagaccccgccccagtgatcatgtggctgtccccacagaaaaagttcatcacc
accaagacgattggaaggctctctgtgttgccagacggtacccttgaggtccgctatgct
cagattcaagacaatggtacatatgtgtgtatagccagcaatgcaggtgggaatgacacg
tctcttgctcacttgcacattcacagctactcaccagactggccacaccagcccaacaag
acatttgccttcatctccaaccagccagcagaaacaggtacaaacgacacaagagccaac
gtcccttttccattcgacataaagacattgatcattgcgaccacaatgggcttcatctcc
tttctcggcgtcgtcttgttttgcctggtgctgctctttctgtggagcagaggaaaaggc
aacactaagcacaacattgagattgagtatgtgccacggaaatcggacgctggcatgagc
agcagcacagtggaagcaccgcgcaagtttaacatgaaaatgatataa
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