Solea senegalensis (Senegalese sole): 122776014
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Entry
122776014 CDS
T07721
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssen01001
]
122776014
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122776014
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122776014
Protein kinases [BR:
ssen01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122776014
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122776014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
PHD
zf-RING_UBOX
zf-RING_5
zf-RING_2
PHD-1st_NSD
DUF5054
Motif
Other DBs
NCBI-GeneID:
122776014
NCBI-ProteinID:
XP_043892258
LinkDB
All DBs
Position
LG10:complement(12596163..12607875)
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AA seq
957 aa
AA seq
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MRIFGQEQVQQMDGRADQQESAGASEITRVQEKSGSAREHVDMDSCPVCHLKFHSREPRL
LPCLHSFCHRCLPSPSRVLAIAALQNSDTKPLNVIRCPVCRQECMETDVVENVFVKDSAE
APSSTAAERTLQLCMTCEDNTESAGFCVDCVEYLCATCVEAHQRVKFTKDHNIRHKTEVS
QEVHVMSTQRPVFCDIHKQEPLKLFCETCDQLTCRDCQLVKHKDHNYQFLEDAYKNHRQH
MERATLQLQEKKKLIEDVSNSINNGLLRVDQNRTSVHDEIQKSICSLILEINKKGNMLIN
QLEAVTKDHESVLRKQQEDVGYLSRHLDHVIKFTKWATAKNGGTGFLYTKRLILFQIENL
LRAKCSTSFIPQSTVHFQCRSLYWASNIDLGSLVIESIPGHQLVGFQGIPHQLSHHGRAP
SGSPRSFALGAPVNTLAQLQLQVDKLNPQALWQPQAPPSPWSWYQSVRLQRTVPGPLQGS
SPSHIGPPQPGRRFTVPPPNHTSPTSSAPSPGFTPRPLRTVVSSSSHQDKPVDGASSSPL
YSQITPLPVCSSQSGQTIEPTYLNKSAMLTPNCPQSLPPSLTHRNVRGRQTSPEYFQVEK
SWTVSWKPPETQQASGVTGSAVKKRRRSSPGPAIVIKDEPEDDSNYVQNKQGASPPDSTG
EQHPQVSAQGDGEKVPTPPQSSDGKLQSLSKPPSRPRDQRRGREQQVDQKKAQAEDSNEV
LCAVCQSGGDLVCCGRCLRVFHPVCHVPSLLKSPSGKWFCSFCRDPSAPEMEYDCDPSRP
ETKTVKKEFDSEGEFPPEDKRKCERLLLHLLCNHQSSNLRETGPPSACANNSPTINGQMS
LLTVRRRLDAKHSLYYQSTAEFVSDIRLIFRNCGVLNEANTEDTAAGRKLMALFEERLMT
LFSDQSFPEIKLEIKPADHSDSRVSSPDKMSHPAKSQRTCSYSQDTPNCFNGDEAAV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctttggtcaggagcaagtgcagcaaatggatgggagagcggaccaacaggag
tctgcgggtgcttctgaaatcacgcgcgtgcaggagaagtcaggaagcgcccgcgaacac
gttgacatggactcttgcccagtttgccacctgaagttccacagccgtgaacccagactc
ctgccgtgtctgcactctttctgtcacagatgtttaccttctccctccagggtcttggcc
atcgcagcgctgcaaaactccgacaccaaaccactgaatgtgatccgctgtccggtgtgc
aggcaggagtgtatggagacggatgtggtggaaaacgtctttgtgaaggactcggctgag
gctcccagcagcacagcagcggagaggacgctccaactctgtatgacctgtgaagacaac
acggagtctgctgggttttgtgtggactgtgtcgagtacctctgtgccacatgtgtggag
gcccaccagagggtcaaattcaccaaagaccacaacatcagacacaagacagaagtatca
caagaagtccacgtcatgtcgactcagaggcccgtgttctgtgacatccacaaacaagag
ccgctgaagctgttctgtgagacctgtgatcagctaacctgccgtgactgccaactggtg
aagcacaaggaccacaattaccagtttctcgaagacgcttataaaaaccacaggcagcac
atggagagagcgacccttcagctgcaggagaaaaagaaactaattgaagatgtgtcaaac
tccataaacaatggacttcttcgggttgatcagaaccgtacatctgttcacgatgaaata
caaaagtccatctgcagtttgattctcgagataaacaagaagggcaatatgctaattaat
cagcttgaggctgtaacaaaggatcacgagagtgttttgcgaaaacaacaagaggacgtt
ggctatctgtccagacacctggatcatgtcatcaaatttaccaaatgggccacagccaag
aatgggggcacaggctttttgtacactaagcggctgattctgtttcagattgagaacctc
cttcgggcaaaatgcagtacctcatttataccacagagcactgttcacttccagtgtcga
tccttgtattgggcctcaaatattgatctgggctctttagtgatagagagcataccaggc
caccagctggtcggttttcagggtatccctcatcagctgtcccaccatgggcgcgcgccc
tcaggctcaccccgaagctttgctctcggagctccagttaatactctagctcagctccag
ttacaggtggacaagctgaacccgcaggccctctggcagccacaggctcctccttcaccg
tggtcgtggtaccagagtgttcgactacagcgtacagtaccagggcctctgcagggaagc
tctccctcccacattgggccgcctcaaccaggccgtaggtttacggtgcctccccccaac
cacaccagcccaacaagctctgcaccgagtcctggatttacaccccggcctctgaggacc
gtggttagcagctccagtcaccaagataaacctgtggatggagcttcctcttcaccgttg
tattcacaaatcacaccattgcccgtgtgttcatctcaatcaggacagacgattgagccc
acgtatctgaacaagagcgctatgctgacaccaaactgtccccagagcctcccgccttcc
ttgacacacagaaacgtgcgagggcgacagacttcgccagagtactttcaagtggagaag
tcatggactgtttcttggaaacctccagaaacacaacaggcgagtggagtgacgggctca
gctgtcaagaaaagacgaaggtcgtcgccagggcctgccattgtcatcaaagatgagcca
gaagatgacagtaactatgtgcaaaacaaacaaggagccagtcctcctgacagcactggt
gaacaacacccacaagtcagtgcacaaggtgacggggaaaaagtcccaactcctcctcag
agttcagacggcaaactccaaagcctgtcaaagcctccaagcagaccccgggaccagagg
agggggagagaacagcaagtagaccaaaagaaagcacaagcggaagactctaatgaagtc
ttgtgtgctgtgtgtcagagtggaggcgacctggtgtgctgtggaaggtgtctcagagtg
tttcaccccgtgtgccatgttccatctctcctcaaatctcccagcgggaagtggttttgc
tctttctgccgcgatccatcggcgcccgagatggagtacgattgtgacccgagcagaccc
gagacgaaaacagtaaaaaaggaattcgactcggaaggagaattccctcctgaggacaaa
cgaaagtgtgagaggctgttgctgcacttactttgcaatcaccagagttcaaacctgcga
gagactggacccccctcggcatgtgctaataacagtccgactataaatgggcagatgagt
cttttaactgtgaggaggcgactggatgctaaacacagtctgtactaccaaagcactgca
gagtttgtatccgacatcaggctcatcttcaggaattgtggagtcctcaacgaggcaaac
acagaggacaccgcggcaggccggaagcttatggcgttgtttgaggagcgcctgatgacc
ctcttttctgaccaaagcttcccagaaataaaactggagataaaacctgctgaccactca
gactctcgagtgtcatctcctgacaaaatgtcccaccctgcaaagagccagcgcacatgt
tcatactcccaggatacgccaaactgtttcaatggagacgaggcagcagtataa
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