Solea senegalensis (Senegalese sole): 122776099
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Entry
122776099 CDS
T07721
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04110
Cell cycle
ssen04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122776099 (smc1b)
04114 Oocyte meiosis
122776099 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122776099 (smc1b)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122776099 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
122776099 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
122776099
NCBI-ProteinID:
XP_043892412
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All DBs
Position
LG10:8293183..8304203
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AA seq
1253 aa
AA seq
DB search
MGYLKQLDVENFKSWRGKQIIGPFMKFNCIIGTNGSGKSNVMDALSFAMGDRAAVLRVKH
LRDLVHGAHIGQPVSDTTSVALHYCDDEDQETVFRRRISGNSTEYCINGRTVSHAKYIEE
LQKIGIVTKAQNCLVFQGAVESIALKDPKERTKMFELISQSSEYAAEYEKKKMALAKARE
DTQFHFNKKKAANVERKQVFQEKREAEKFQALLDDLHQNRLKLSLTELYHNEKAIGIVSD
NLGEKQQAATALNNKVMTLEQTLKTHKKEHGRLTREQQQIEKEIRAQEHTLSQFRSQYIS
TKMNTTHHMKKAEELRKALKSKQNMLAMKKKEIAGSRQEIDELEKTWRSYENQVQQQGIS
SGRDIELGADQLERYKELKELARKQGAVFRQQAEKLNWEVKADYENVAFVQRRKKEVEHG
IRNSQSQLEDLTIRAEKLEDYSKTCEASLEEYCQLEKSLTAELQRVQQRCQEVNQELGQV
LEELGNARLDNQESRRQLQRKELLKKLQRLYPESVYGRLSDLCSPIHKKYQLAVTKVFGH
NMNAIVVTTEKVARQCISFVKEERSEPETFLPIDYLDVRPLKERLREVPGAKMVVDVVKI
NATTGAAHLKKVVQFVCGNALVCETIKEARNMAFGGKERIKTIALDGTMFAKSGVISGGS
SDLRSRARCWEEKDVTRLRERKEQLTAELRDLMKLKRKDSDLKQVVAQAQGAQIRLKYSK
NELENLRKKNTPKCQAEISRMESEVANLDYQIQMQLESVEGKEAEMRKIRDQINQMEDLV
FSDFCAEIGVNSIREYEQEHLKQQAELDKKRLEFESQCARLSAQLEYEQGRLEQQKKQLH
KMEVTIMEEERIMAEQKEDEEKLLLAVEEAQDKLLQVENQLLSKKSKVAAAKAELDQKTQ
RLREISKDLVNLQQEVMFAETTLEQKRLARHNLLLAVKIQNVPITLLSGSLTEISQVQLD
TESESTLATTDIYEREAQLVIDYSSLGAKLRSLQTEEEVEAHLEKLKASVSSIEGVLHHT
ATPNLKALERMREVRYKLQGVTEAFEACSSAARRCYQEFEKIKAQRCRTFSQCFEHVAIV
IEQIYKRICRNRSAQAILSAENAEEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIASLAL
LFAFHSFHPAPFIVLDEVDAALDNTNIGKVTTFIREESKHNMQIIAISLKEEFFSKSDAL
LGVYSDFDECMFSGILSLDLRPYPLAEEDNGKTADKEERMVVTQEASSLRSPA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttgaaacaacttgacgtggaaaacttcaagtcgtggcgagggaagcaaatt
atcggccctttcatgaaatttaattgcataattggcacaaatggctcaggcaagtccaat
gtgatggatgccctgagcttcgccatgggggatcgggctgccgtcctccgggtaaagcac
ctcagagacttagtccatggagcccacattgggcagcctgtgtctgacaccaccagtgtt
gccttacactactgtgatgatgaggaccaggagaccgtcttcagacggaggatcagtggt
aattccactgagtattgcatcaatggtcgaactgttagtcatgccaaatatatagaggag
cttcaaaagattggcattgtgaccaaagctcaaaactgtctggtgttccagggggcagtg
gagtccatagcgttaaaggatccaaaggagaggaccaagatgtttgaactaatcagccag
tcgagtgagtatgctgctgagtacgagaagaagaaaatggcactggcaaaggccagagaa
gacacccagttccactttaacaagaagaaagctgccaatgtggagaggaagcaggtgttc
caggagaaaagggaggctgagaagttccaggctctgctggacgaccttcaccaaaaccgc
ctgaagctgagcctgactgagctctatcataatgaaaaggccattggcattgtcagtgac
aacctgggggagaaacagcaggctgcgactgctttgaacaacaaggtgatgaccttggag
cagactttaaagacccacaagaaggaacatggacgcctaactagagagcagcaacaaatt
gagaaggaaatccgtgcccaggagcataccctgtcacagtttaggtcccagtacatcagc
accaagatgaacaccactcatcacatgaaaaaggctgaggaattgcgcaaggccctgaag
agcaaacagaatatgctagccatgaaaaagaaggagattgcagggagtcggcaggagatt
gatgaactggagaagacctggaggagctatgaaaaccaggtccaacagcagggaatctcc
agtgggagggacattgagctaggagcagatcagctggagcgatacaaggagctaaaggag
ctggcccgaaagcagggggctgtcttcaggcagcaggcagagaaactgaattgggaggtg
aaagctgattatgaaaatgtggcttttgtccagcgcagaaagaaggaagtggagcatggc
atcaggaacagccagagtcagctggaggatttgacgattagagcagagaaactggaagac
tacagcaaaacctgcgaggcatcccttgaagagtattgtcaactggagaagagtctgaca
gctgagctgcagagagttcagcagcgctgtcaggaggtgaaccaggagctgggtcaggta
ctggaggagctggggaatgctcgtctggacaatcaggagagcagacgccagctgcagcgc
aaagagctacttaagaagctccaaagactttaccctgaatctgtgtacggtcgactctct
gacttgtgtagtcccatccataagaagtaccagctggctgtcaccaaggtgtttggccac
aacatgaatgctatagtggtgaccacagagaaagtggcccgccaatgtatctcatttgtt
aaggaggagcgttctgagcctgaaaccttcctgcccattgactacttggatgtgagacct
ctgaaagagcgactgagggaggtgcctggtgccaagatggtggtggatgttgtcaagata
aatgctaccacaggggcagcccatctgaaaaaggtggtccagtttgtctgtggcaatgcc
ttggtgtgtgagactatcaaagaggctcggaatatggcgtttggtggaaaggagcgcatt
aagaccatagcgctagacgggacgatgtttgcaaagtcaggtgtgatctctggaggctcc
agtgatctgcggagcagagctcgctgctgggaggagaaggatgtgacgaggctgagggag
cgcaaagaacagctgacagctgagctacgtgatctaatgaagctgaagcggaaggattcg
gacctgaaacaggtcgttgctcaggcccagggtgctcagatccgcctcaaatactccaaa
aatgagctggaaaacctccggaaaaaaaacacccccaagtgccaagcggaaatctctcgc
atggaaagtgaagtagcaaacctggactatcagatccagatgcagctcgaaagtgtggag
ggaaaggaggcagagatgaggaagatcagagaccagatcaaccagatggaggacctggtg
ttttctgatttctgtgctgagatcggtgtgaacagcatccgggagtatgagcaggagcac
ctgaaacagcaggcagagcttgataagaaacggctggagtttgagagtcagtgtgctcgt
ctgagtgcacaacttgagtatgaacagggacgactggagcagcagaagaagcagcttcac
aaaatggaggtgaccatcatggaggaggagagaatcatggcagagcagaaagaggatgag
gagaagctgctgctggcagtggaagaagctcaggacaaactgctgcaggtggagaatcag
ctgctgtctaagaaaagcaaagtggctgctgccaaagctgagctggaccagaaaacccag
cgccttcgggagatcagcaaagatttggtgaatttgcagcaggaggtgatgtttgccgag
accacattggagcagaaacgcttggccagacacaacttactgctggccgtcaagatccag
aatgtgcccatcactctgctgtcagggagcctgactgaaatcagtcaggtgcagttggac
acagaatctgaaagcactttggccaccactgacatctacgagagagaagctcaactagtc
atcgattactcctcgctcggggcaaaactcaggagtttgcagacagaggaggaggtggag
gctcacctggagaagctgaaggcttcagtgtcctccatcgaaggagtgctgcatcacaca
gccacccccaatctgaaagctctggagaggatgagggaggtgaggtacaagttacaggga
gtgacagaagccttcgaagcgtgctccagcgcagccagaaggtgctaccaggagtttgag
aaaatcaaagcacagcgttgccggaccttcagccagtgctttgagcatgtggcgattgtg
atcgagcagatctataaaagaatctgcaggaaccgcagtgctcaggccattctgagtgca
gaaaatgcagaggaaccgtacctcggaggcatcaattacaactgtgtggcaccggggaaa
cgcttcatgtccatggacaatctgtctggcggagaaaaggccatcgcttctctggcgctg
ctgtttgcctttcacagtttccatcctgctccttttatcgtcttggacgaagtggacgca
gccttggacaacactaacatcggcaaggtgaccacgttcatcagggaggagtccaaacac
aacatgcagatcatcgccatctctctgaaggaggagtttttctccaaatcagacgctctg
ttgggagtctattcagattttgacgaatgcatgttcagtggcattctgagcctggacctt
cgaccctaccctctggctgaggaagacaatgggaaaacggccgacaaggaggagagaatg
gttgtaacccaggaagcaagtagcctgcgttcacctgcatga
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