Solea senegalensis (Senegalese sole): 122776155
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Entry
122776155 CDS
T07721
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122776155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122776155
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122776155
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
HECT type E3
122776155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
122776155
NCBI-ProteinID:
XP_043892482
LinkDB
All DBs
Position
LG10:complement(3785998..3797855)
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AA seq
1019 aa
AA seq
DB search
MFSWGEHSGTGFRLQDSHVVHTAAEAEVHSLNLGYHVSDLSAGRGVLAFVKTNGNAFIIR
TNEGKDGKRVRGKQKCVKCKEHIEAVSCCDDVVVLLSKGGSVYCVDTTVPPFTPRKPDVL
NNIPVSQVACGSGHSLVLTKDGQVYTWGQDSRGQLGLGKRKPGANSPQQLKSLSAMPLVR
VAAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTADRHKPTAVKCLNMKKSVQICCGKDHT
ATVTKDGAVFTFGSGQYGQLGHNSLRDELRPRLVAELLGAKVTKIACGMHHTLVLTDSDK
VYSFGCGEQGQLGRGGTEGHPSVPLPVQLPQGSCDGPNIRNIYAGGNCSFATCTSDEFPL
QESNTDAVGNVSLFCLEDVIDKWTSTCDPKSWKKVKLEIHRAFSSAACANQSFLEKSKDK
HFQTSTKYHGLNLSLARHTFRKLVKTENVLAEVEAAVLHLLLSSHEPPVGVEGLRIFLLL
SELLFRIQKHKGRQSTKLTEAVAAAVLGLPAESLQVIGNWWNSLSASTMSKYVMVWKKAL
SVILSSKPVPRNSGVQNLLLVLQCMYNANSRTAESHRIPSSDFCLVVDVNFLREDLEHWL
IQSMYKNANAKPLILCSFPFMMDLQSKKQVFDMYTNTTKKMTMGDFWWNMFIECGPENLP
PDLFFNLNLRRDTILEDTFEELSAAPHSDYRKWLAVHFDGNSAHSNVYKKDFFYDVFHEM
VSAESEMFIFNDAKTLAWFPSRPTQDHHRYFLFGVLCGLALYNRCIIYLPFPMALFKKLL
GVKPSMEDMMEFCPFVGKSLLSILEEYADLDFTSLEMDFLITWDGTDVDLDPGNPEKPVT
SQTKKEFVDAYVNHAFNTSVKSVFTEFKQGFFEVCGQEMVKLFQPKELQEVLVGRDFHAW
ERLKQDTIYEGEYHVSHPTIQMFWDVFEELTEDQKISFLWFVTGFDRVPIHGMAKIQMKI
RVKQEWNLPYDQDKNLPDDQYYPESYTCHTMLDLPLYSTREIMQTKLIEALSNKRKNYK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtggggagaacacagtgggaccgggtttcggctccaggactcccacgtcgtc
cacacggcagcagaggctgaagttcactcgttaaacctcggttatcacgtcagtgatttg
tccgcgggccgcggtgttctcgcgtttgtcaaaaccaacgggaacgccttcatcatccgc
accaacgagggtaaagatggaaaaagagtccgagggaaacagaagtgtgtcaagtgtaaa
gagcacatcgaggctgtgagttgttgtgatgatgtggtcgtgctgttgtcaaagggaggc
tctgtttactgtgtggacacaactgtgccccccttcacccccaggaagccagacgttctg
aacaacattcccgtttctcaggttgcctgtggaagtgggcattcacttgtcctgaccaaa
gatggtcaggtgtacacgtggggtcaggactccaggggtcagctgggtctggggaagagg
aagcccggcgcaaactcaccccagcagctcaagtctctgtctgcgatgccgctggttcgc
gtcgctgcagggggagagcagagttttgccctctctgtctctggaggcgtgtttggctgg
ggcagaaacgaccgcggacagctcggactgggagacacagcagacagacacaagccaact
gctgtgaaatgtctgaacatgaagaaaagtgttcagatctgctgtgggaaggatcacact
gccactgtgacaaaggacggtgccgtgtttacatttggctcgggtcagtacgggcagctc
gggcacaactcgctccgcgacgaactccgtcctcgtcttgttgcagagctcttgggggca
aaggtcaccaagattgcatgtggaatgcatcacacgttagtgttgacagactctgacaag
gtctactcctttgggtgcggagagcaagggcaactgggacgaggaggcacggagggtcac
ccgtcggtgccgctgcctgttcaattgccacaaggcagctgtgacggtcccaacattaga
aacatctacgccggaggaaactgctcctttgcgacctgcacgtctgatgagttccctttg
caggagtcgaacactgacgccgtcggaaatgtctcactgttctgtctcgaagacgtgatt
gacaaatggacgtccacatgtgatccaaagtcgtggaaaaaggtcaaactggaaatccac
agggcgttttcctctgcagcgtgtgccaatcaaagcttccttgagaaaagcaaagacaaa
cacttccagacctcaacaaagtatcacggcttgaacttgtcactcgcaagacacactttc
aggaaactggtgaagacggagaatgttttggcagaggtagaagccgcagtcctgcacttg
cttctttcctctcacgagccgccagtgggagtggaaggtctgaggatcttcctgcttctc
agcgagcttctgtttaggatccagaaacacaaagggcgacagagcacgaagctcacagag
gcggtcgctgccgctgtgctcggcttacctgccgaaagccttcaggtcataggaaactgg
tggaactcactgtcggcctccaccatgtccaaatatgttatggtttggaaaaaagctctc
tcggtcatcctgtcgtctaagccagttccccgcaactctggagtccaaaatctgctgctc
gtcctccagtgtatgtacaacgccaacagcaggacggcagaatcccacaggataccgtca
agcgacttttgcctggtggtcgatgtcaattttcttcgagaggatctggaacattggctt
atacagtcgatgtacaagaatgcaaatgccaagccacttatcctttgtagctttccattc
atgatggatctgcagtcaaagaaacaagtttttgacatgtatactaataccaccaagaag
atgacaatgggggacttctggtggaatatgttcattgaatgtggacctgaaaatttgcct
cctgacctgttctttaacctgaacctgagacgagacacaattttagaggacacttttgaa
gaactgtctgctgctcctcacagtgactacagaaaatggcttgcagtccattttgatgga
aactctgcacatagcaatgtctacaagaaagacttcttttatgacgtctttcatgagatg
gtgtcagctgagtcggagatgttcattttcaatgacgccaaaacactggcatggttcccc
tccaggccaacacaagaccatcacaggtacttcctgtttggcgttctttgtggattggct
ttgtacaaccggtgcatcatttacttgcccttcccgatggctttgttcaagaagctgctc
ggcgtgaagccctcaatggaggacatgatggaattctgtccctttgttggaaagagtctg
ctgtccatcctggaagagtacgcggatctggactttacaagcctagaaatggatttttta
atcacctgggatgggacagatgttgaccttgacccgggaaatcctgaaaaaccagtgaca
agtcaaacaaaaaaggagtttgtggacgcctatgtcaaccacgccttcaacacctcagtg
aaaagtgtgtttacggagttcaagcaaggcttcttcgaagtgtgtggccaggaaatggtg
aagctgttccagccaaaggagctacaggaagtgctggtgggcagagactttcatgcctgg
gaaagactgaaacaggacacaatatatgagggcgagtaccatgttagtcaccccaccata
cagatgttttgggatgtctttgaagagctgactgaggatcagaagataagcttcctatgg
ttcgtgacaggttttgatagggttcctattcatgggatggcaaaaatccagatgaaaatt
cgggtaaaacaagagtggaacctcccctacgaccaagacaagaacctccctgacgaccag
tactaccctgagtcatacacatgtcacactatgctggaccttcccttgtactcaacaagg
gagattatgcaaaccaagctgatagaggccctgagcaataaacgtaaaaactacaagtga
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integrated database retrieval system
