Solea senegalensis (Senegalese sole): 122776308
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Entry
122776308 CDS
T07721
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122776308 (ppfibp1b)
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122776308 (ppfibp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
122776308
NCBI-ProteinID:
XP_043892701
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Position
LG10:20006310..20044166
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AA seq
968 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGLFDCQSPTSPFMGSLRALHLLEDLRSVLE
MLDTEERENLRCQIPDSTADSLVEWLNGHLSNGHISLSSGDHYQERLTRLESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLDEHREKLNATEEMLQQELLCRTALESQKLELISELSNL
KLKFNTIDKERVDFDDRFRDSEDLILEINELRYRLTDMESEKLLYEKKLKSTKEELAVLR
RQLEGKDGEMRRLQDETGFKAMALSNADPSDRVSHPDETLRKRLKEKHVEVQRMKKAVES
LMAANEEKDRKIEELKQSLVRYKKVQDMVMSVQGKKERTKDNEYIESHGDASLAFLSTIL
PPTEPEKNEETDVHQLKRKSPDELEILNGMSLNSSPSPSPSDPEQVFESTPTDVESSHDT
TKMSSQEHLDRSNNEKNTSEEVSKLSEKPPLNPSATLPAATTTTTDDEAFGSRKARSSFG
KGFFKIRGGKKTGSSPNLDRSRSASAPMLAETERQGTDHLDLAGLPQRSANSDSTNTLPT
TPEGRKKSKGIMKLFGKLKRSQSTTFTLDDNLPEGEFKRGGVRATAGPRLGWSRDLQQVS
NDVDAPFARWSKDQVCDWLQDQGLGLYVNISRVWISSGQTLLQASQQDLERELGIKHPLH
RKKLQLALQALGSEEEENKGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDD
LLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLR
SVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLIGSE
AQHLKQECLENPDYTLLTATTKVKPKKLPFGSFGSLRKKRQDENEEYVCPMDVEMPKGRS
FQKGFELQIYEDELDRLQQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPS
VTDEDSNA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatgccagcgacatgttggcagcagccttggagcagatggatggcattata
gcaggatcgaaggctctggactattctaatgggttgtttgactgccagtcgcccacttcc
cctttcatgggcagcctgcgggcgcttcaccttctggaagacctgagaagtgtcctggag
atgctggacactgaggaaagggagaatctgcgctgccagatccccgactccacagctgac
agtctggtcgagtggctcaatggtcacctgtccaatgggcacatctctctgagtagtggt
gaccactatcaagaaagacttaccagactagaaagtgataaggaatctttggtgcttcag
gtgagtgtgctgacagaccaggtggaagctcagggagagaagattcgtgacctggatttg
tgtttggatgaacacagggagaaactcaacgccactgaggagatgctgcagcaggaactt
ctgtgcagaactgcactggaatcccagaagcttgaactgatatctgaactgtcgaacctg
aagctgaagtttaatactatcgacaaggagagagtggactttgatgacagatttagagac
agtgaggatctgattcttgaaattaatgaactgcggtacagattgacagatatggaaagt
gaaaaactactgtatgaaaagaaacttaaatccactaaggaggaactagccgtgctgagg
aggcagctggagggcaaagatggagagatgaggagactacaggatgagacaggcttcaaa
gccatggccttgagcaatgcagatccctcagacagagtctctcatccagatgaaactctt
agaaagaggctgaaagaaaaacatgtggaagtgcagagaatgaaaaaggcagttgaatct
ttgatggcagccaatgaagagaaggatcgtaagattgaggaattaaagcagtcgttggta
cggtacaagaaagttcaagacatggtgatgtcggtgcaagggaaaaaagaaagaaccaaa
gataacgagtacattgagagtcatggcgatgcgtctctcgcatttttgtcgaccatcctt
ccacccacggagccagaaaaaaacgaagaaacagatgttcatcagctgaaaaggaaaagc
ccagatgagctggaaattctcaatggaatgagtttaaattcttcaccttcaccaagccca
tcagacccagaacaggtgtttgagtccacaccaacagatgtggaaagcagccacgatacc
acaaagatgagcagccaggaacatctggacaggagcaataatgaaaagaatacaagtgag
gaagtcagtaaactgagtgaaaagccacctttgaacccctctgccactttacctgctgcc
accaccaccaccacagatgacgaagcctttggctctagaaaggctcgttcgtctttcgga
aagggttttttcaagattcgtgggggcaagaaaaccggcagctctcctaaccttgaccgc
agccggagtgcgagtgcgcctatgctagctgagacagaacgacagggcaccgaccatctc
gatttggccgggctgccgcagaggtcggctaacagcgacagcaccaacacacttcctaca
accccagagggcaggaaaaaatccaagggaattatgaaactctttgggaagttgaaaaga
agtcagtctaccacattcaccctagatgataacctaccagagggtgagttcaagcggggt
ggagtgcgagccacagcaggacccagactgggttggtcacgtgacctccaacaagtcagc
aatgatgtcgatgctccgtttgcacgctggtcaaaggatcaggtgtgtgactggctccag
gatcagggtctcggtctttatgtgaacatttctcgtgtgtggatctcctctggacagacg
ctgctccaggcctcacaacaggacctggagagggagcttggcatcaaacacccactgcac
aggaagaagctgcagctggctctccaggccctcggctcagaggaggaggagaataaggga
aagctggactacaactgggtgacaaggtggcttgatgacatcggtcttcctcagtataag
acccagtttgatgagggcagggtggatggccgcatgctgcattacatgacagtggatgac
ctgctttctctgaaggtgggaagtgtcctgcatcacctcagtatcaagagagcaatacaa
gtgcttcgactcaacaactacgagcccaactgcttacgtcgtaggccatcagacgagaac
aacatttctccagcagaaatctcccagtggaccaaccacagggtgatggagtggctgcga
tcggtggaccttgctgaatatgcccccaacctgagaggcagtggtgtgcatggaggcctg
atggttctggagccacggttcaacgtggagaccatggcgttgctgctgaacatcccccca
aacaagactctgttgcgtcgccacctcgctacacattttaacctgctcatcggctcagag
gctcagcatcttaaacaggagtgtcttgaaaacccagactacacactgctcactgccacc
accaaagtcaagccaaagaaactgccgtttggcagcttcggcagtctgaggaagaagagg
caagacgagaatgaggagtatgtgtgtccaatggatgtggagatgccaaagggcagaagc
ttccagaaaggctttgagctccaaatctacgaggacgaacttgacagactccagcagatg
gaggactctgagggaactgtgagacagattggagctttctctgagggcattcaaaacctg
acgagcatgctgaaagatgacgagttcttcaaagagatttcaaattcacccaaccccagt
gtaacagatgaggactccaacgcatga
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