Solea senegalensis (Senegalese sole): 122776331
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Entry
122776331 CDS
T07721
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122776331
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
122776331
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
122776331
NCBI-ProteinID:
XP_043892740
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Position
LG10:complement(14741174..14756124)
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AA seq
1188 aa
AA seq
DB search
MEKFQSSMRKRLYSLPQNIGQKSPVIDEGDGDKDTKRKSIRLKHLSSLSPASSCRSFEEA
RSEHLERDVIVKTNLNGDCRLFRGSISSVTGRHPPGSDPAEQQRLIPEADTGVSESFPCE
LGAGAQQRAAGGAGVAAGQASEFEQPGFIKLEVAEQLIPEDDRLYQAGFMHRQFGAMLQP
GVNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGI
TFFKDEHTPPWIVFNVLSDTFFLIDLVLNFRTGIVKEDNTEIVLDPQKIKIKYLKSWFVV
DFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEV
FHMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVTRNKMVNDTWGQQ
YSYALFKAMSHMLCIGYGLHPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDSSR
RQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLREEIINF
NCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDFIIREGTIGNKMYFIQHGVVSVLT
KNSKDTRLTDGSYFGEICLLTRGRRTASVRAENYCRLYSLSVDNFNEVLEEYPMMRRAFE
LVAVDRLDRIGKRNSVLQHNVQHHQSSGTLNLQETEIIQRIVQHDRDMAECTPLIQTGMA
HNLPSPPSPTPVIWAPLVQAPLQAAAATTPLALALAHHSPFPPILFHHPVAPDSVSVKDH
SSHPKRAHVGVNTSSSCGSGPGSPASCTKFHYGVETPIQTALRTQNPSSGPVFPPLKSHS
IFTSGLQPLTPLPTHQPTHHPPHSGIASAFPISQSTVSYSCSAQLRSQPFHSVMTSPPHP
ISLLQQVAPRRHAGRFPAPSASTISPLICSSVTPILSHLQQNSHPTLQQMTSSHDRAGRT
PSGLNVANLPFITSTPPSSGFMQAASVAGAASSLAQHSLAGLQSIFLPQVLPEHSALASL
AQYGSAEASPCYTPPLQSPSVQSPVRGRTVYHSETPSTVDPHSPLTSLTPQTLCPSTVAC
TLNERAESAVNLFTQEVKTISGSHSSVYQERPLAMSSSSDGASVRASSPLSSSSKPFSPI
PGQTTPISRTNSGPEPQKQPVGVHSPHVRSPSKMLETEHKQSKLPSNL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattccagtcttccatgcgcaaacggctgtacagcttgccgcaaaatattggg
caaaaatcaccagtgattgacgaaggagacggggacaaggacactaagaggaaaagtatt
cggttgaaacatttgtcctctctgtctcctgccagcagctgcaggagctttgaggaggcc
aggagcgaacacttggagagggatgttattgtgaagaccaacttgaacggggactgtcgc
ttattcaggggcagcatctcctccgtcaccgggcgacatcctcccgggtcagacccagcc
gaacagcagcgcctcatcccggaggctgacaccggtgtcagtgagagtttcccctgtgaa
ctcggcgccggggcccagcagcgggcagcggggggagcgggtgtcgcagccggacaagca
tctgagtttgaacagccaggtttcatcaagctggaggtcgccgagcagttaatacctgaa
gatgatcgcctgtaccaagccggattcatgcaccggcagtttggcgccatgcttcagccc
ggtgtcaacaagttctccctgcggatgttgggcagtgagagggccgtggagcacgagcgg
gagcgggtcaagtctgctggcttctggataatccacccgtacagtgattttaggttctac
tgggatctgaccatgctgctgctgatggtcgggaacctcatcatcatccctgtgggcatc
accttcttcaaggacgagcacacgccgccctggatcgtcttcaacgtgttgtccgacacc
ttcttcctcatagacctggtcctcaacttccgcacaggcatcgtcaaggaggataacaca
gagatcgtcctggacccacagaagatcaagatcaagtatctgaagagctggttcgtggtg
gactttatctcctccatacctgtggactacatctttctcatcgtggaaactcgcatcgat
tccgacttttacaagacggcccgggctctgaggatcgtacgtttcaccaagatcctcagt
ctgctgcggctgctgcgactctcccgactcattcgctacatccaccagtgggaagaggtt
ttccatatgacctatgatctggccagcgctatggtgcgtatcatgaacctgattggtatg
atgctgctgctgtgtcactgggatggctgtcttcagttcctggtgcccatgctccaggac
ttccctcctgactgctgggtcaccagaaacaagatggtgaatgacacatggggtcagcag
tactcctacgccctgttcaaggccatgagtcacatgttgtgcatcgggtacggcctgcat
ccgcccatcggcatggcagatgtgtggctcaccatcctcagcatgatcgtgggcgctacc
tgcttcgccatgttcgtcgggcatgcgactgcactcattcagtctctggactcgtctagg
cgacagtatcaggagaagtataaacaggtggagcagtacatgtctttccacaagctcccg
gccgacatgcgtcagaggatccatgactactacgaacaccgttatcagggcaagatgttt
gacgaggaaagcattttggaggagctgaacgagccactgcgagaggagatcatcaacttc
aactgtcgtaaactggtggcctccatgcctctgttcgccaacgcggatccaaactttgtc
acctccatgctgaccaagctgcgctttgaggtcttccagccgggcgacttcatcattagg
gaaggaaccatcgggaataagatgtacttcatccagcacggcgttgtcagtgttctaacc
aagaacagcaaagacaccaggctgacggacggctcctactttggagagatctgtctgttg
acgcgaggcaggaggacagccagcgtgcgagcagaaaactactgccggctctactctctg
tcagtggacaacttcaatgaggtgctggaggagtatcccatgatgaggagagcctttgag
ctggtggccgtcgaccgcctcgaccgcatcggtaagaggaactctgttcttcagcacaat
gtccagcaccatcagagctctggcacacttaatctccaagagactgagattatccaaaga
atcgtgcaacatgaccgtgacatggccgaatgcaccccgctgatccagaccggcatggca
cacaatcttccttctccaccgtcgcccacccctgttatctgggcgccgttggttcaggct
ccgctccaggccgctgcagccactactccactggctctggctttagctcaccattccccc
tttcctccaattctcttccaccatcctgtggctccagactctgtgtctgtgaaggaccac
agcagtcatccaaagagagctcacgttggagtgaacacctccagcagctgtggttcaggg
cccggctctcctgccagctgcaccaaattccactatggggttgagactcctatacagacc
gctctcaggacacagaatccctctagtgggccagtgtttcccccgctgaagtcccattcc
atcttcactagcggcctgcagcccctgacccctctgcccactcaccagcccacacaccat
ccaccacactctggcatcgcctcagctttccccatcagccaatccactgtctcttacagt
tgctctgctcagctccgttcccagcctttccacagtgttatgacctccccaccccaccca
ataagtttactccagcaggtggcaccaaggaggcatgcaggaagattccctgcaccttct
gcctccaccataagccctctgatctgcagctcagtcacccccatactaagccatctgcag
cagaattctcaccccaccctacagcaaatgacatccagccacgacagagcaggcaggaca
cctagtggtctgaatgtcgcaaatttacccttcatcaccagcactccaccctccagtgga
ttcatgcaggcagcgtctgtggcaggagccgcttcctctctggcccagcacagtcttgca
ggcctccagtctattttcctcccccaggttcttcccgagcactcggccctggcttcactg
gcgcagtacggctctgcagaagcctcgccctgctacacgccaccactccagagtcccagt
gtgcaaagccctgtgaggggaaggacggtgtaccacagtgagacccccagcactgtggac
cctcatagccctctaacctctctaacccctcaaaccttgtgcccatccacggtggcctgt
accctcaatgagagggcagagtccgcggtgaatctctttacccaggaagtaaagaccatc
tcaggctctcacagctctgtataccaggaaaggcctttggccatgagcagctcctcagat
ggggcatcagtaagggcatcaagccccctctcttcctccagcaaacccttcagtcccatc
ccaggtcaaaccactcccatcagtcggacaaattcaggacctgaacctcagaaacagccc
gtcggtgttcactccccccacgttcgatcaccctccaagatgttagagacagaacacaaa
cagtccaaacttccttccaatttgtga
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