Solea senegalensis (Senegalese sole): 122776391
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Entry
122776391 CDS
T07721
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122776391
03036 Chromosome and associated proteins [BR:
ssen03036
]
122776391
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122776391
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122776391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_6
LIM
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
122776391
NCBI-ProteinID:
XP_043892843
LinkDB
All DBs
Position
LG10:7182284..7190100
Genome browser
AA seq
838 aa
AA seq
DB search
MDGGPTEGVGVEVPTKDYPSIQAIHSQDAMVADLLQQAAEAGGVVEAQAGVLEQAHDDGM
AAATQAQQQLMEAGDGGGGVEMMVMNSLDPTLLQMKTEVMEASVGGSTGVGAAHQATVTT
VDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATSVEALQQGTYVDTTAMSKDGDPVIC
HTLPLPEGFQVVKVGANGEVETVEQEEDEGEIHHEEEDDEEVGHQILEEVEDVPIQTQSD
DTNWSKDPDYQPPSGGIRRGKKVKKSRLRYGEGDKDMDVSVYDFEEEQQEGLLSEVNAEK
VVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFR
TVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYCSVEVS
KLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKM
HILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQ
HQKSHKNEKRFKCEMCDYCCRQERHMVMHRRTHTGEKPFACSQCEKTFRQKQLLDMHFNR
YHDPSFIPATFVCPKCSKTFTRRNTMARHAEYCSGENDEAENGTPSPKKGRRGRKRKMMS
RRDDGDSEDDQAELDEEEEDDEEGDLEEEESAMLQEDEEPESMELDQAPASIPVPAPEEP
PVKRKRGRPPKNAPKAPTPSKSVRAAAKTTTIAAAIIQVEDENTGAVENIIVKKEEGDAS
AETPLDDQGVALTVEGVGLDEGGVDTVELAVNEETAAAAAAAANGDLTPEMILSMMDR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacggagggccgacagagggtgtaggggtggaggtccccaccaaggactacccctcc
atccaggccattcacagccaggatgccatggttgctgacctcctccagcaagcggctgag
gctgggggcgtggttgaagcacaagctggagtccttgagcaagctcatgatgacggaatg
gcagcggccacccaggcccagcagcagctaatggaagctggggatggtggaggaggcgtt
gaaatgatggttatgaactcactcgatcccaccctcctgcagatgaagactgaggtgatg
gaagcttcagtgggagggtcgactggagtaggtgccgctcaccaagcaactgtaacaaca
gtggaccagactcaaatcatcacactacaggtggtaaacatggaggagcaagcagctttg
ggcctgggcgagctccagcttgtccaggtgccagtttctgccaccagtgtggaagccctg
caacaaggaacttacgttgataccactgcaatgtcaaaggatggggacccagtcatctgc
cacaccctgccattgcctgagggctttcaggtagttaaagttggtgctaatggggaggtg
gagacagtggagcaagaagaagatgaaggagagatccaccatgaagaagaggatgatgag
gaggtgggtcatcagattctggaagaagttgaagatgtacccatccagactcaaagtgat
gacacaaactggtctaaagacccagattaccaacctccttctggaggaatcaggagaggc
aaaaaggtaaaaaagagccgtcttcgttatggcgagggagacaaggacatggatgtcagc
gtctatgactttgaagaagagcagcaggagggccttctgtctgaagtcaatgctgagaaa
gtggttggtaacatgaaaccacccaaacctactaagatcaagaagaaaggagtgaagaag
acgttccagtgtgagctgtgtagctacacctgccctcgccgctccaacctggacagacac
atgaagagccacaccgacgagagaccccacaaatgtcacttgtgtggcagagccttcagg
acggtcacactgctaagaaaccatctcaacacacacaccggtacccgtccacacaagtgc
acagactgtgatatggcttttgtgacgagcggagagctggttcgtcatcgtcgctacaaa
cacacacacgagaaacccttcaaatgctccatgtgtgactattgtagtgtggaggtgagc
aaactaaagcgtcacattcgatcccatactggcgagcgaccattccagtgcagtctctgt
agctacgccagcagagacacatacaagctgaagagacacatgaggactcactcaggagag
aaaccttatgagtgctacatctgccatgcacgctttacccagagtgggaccatgaagatg
cacattctgcagaaacacaccgagaacgtggccaaattccactgtccacactgtgacact
gtcattgcacggaagagtgatttgggcgtccatcttcgaaagcagcactcgtttatcgag
actggaaagaagtgccgttactgcgatgccgttttccacgaacgctacgctctgatccag
caccagaagtcccacaagaacgagaaacggttcaaatgtgaaatgtgtgactactgctgc
cgccaggagcgacacatggtgatgcatcgtcgtacccacactggagagaaacctttcgcc
tgcagccagtgtgaaaagactttcaggcagaagcaactgctggatatgcacttcaaccgc
taccacgaccccagctttatccctgccaccttcgtctgccccaagtgcagcaagaccttc
acccgcaggaacaccatggcacgccacgccgagtactgcagcggcgagaatgacgaggct
gagaacggaactccgtcccccaaaaaggggagaagaggaagaaagaggaagatgatgagc
agaagagatgatggtgacagcgaggacgatcaagccgagctcgacgaagaggaggaggac
gacgaggagggagacttggaggaagaagaatcagccatgctacaggaagatgaggaacca
gagagcatggagctggaccaggcccctgcttccatccctgtaccggcccctgaagagccg
ccagtcaagaggaaacgaggccgacccccaaagaatgcccccaaggctcctacacccagc
aagtctgtcagagcggccgccaagacaacgactattgctgctgccatcattcaggtggag
gacgagaacacaggagctgtggagaacatcatcgtgaagaaggaagagggcgacgcctct
gcagagactcccctggatgatcagggtgtggccctgaccgtggaaggggtaggactggat
gagggaggggtggatactgttgagctggctgtgaatgaggaaacggcagctgctgccgcc
gccgccgccaacggcgatctgacgccagagatgatcctgagcatgatggaccggtga
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