Solea senegalensis (Senegalese sole): 122776406
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Entry
122776406 CDS
T07721
Name
(RefSeq) partitioning defective 6 homolog alpha-like
KO
K06093
partitioning defective protein 6
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04144
Endocytosis
ssen04517
IgSF CAM signaling
ssen04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122776406
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122776406
09144 Cellular community - eukaryotes
04530 Tight junction
122776406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122776406
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
122776406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
CcdA
Motif
Other DBs
NCBI-GeneID:
122776406
NCBI-ProteinID:
XP_043892868
LinkDB
All DBs
Position
LG10:complement(7251648..7268490)
Genome browser
AA seq
463 aa
AA seq
DB search
MSSQHHQHHQQQQHHQLLAQQQDSSSNSSSSVILINSRPTSRMSRQQQQHQQQHLQQQQQ
QQRTSLKLYNTVVEVKSKFEAEYRRFALKRNGPDGFQEFYHLLQTIHHIPGVDVILGYAD
VQGDLLPINNDDNFHKAVSSANPLLRIIITKREDEPVVFGTNSLQRRKKGLGLTGLRPTG
SGSTHSKNKPGLMIGLPQNFRQISSIIDVDILPETHRRVRLHKHGTHKPLGFYIRDGVSV
RVAPQGVEKVPGVFISRLVRGGLAESTGLLAVNDEILEVNGIDVAGKSLDQVTDMMVANS
HNLIVTVKPANQRNNVVHRGSKTSMGNSGSVGSAGSTGSALSHDSPSPASQSNPITASNS
IAEGDSDDDDDDDGDLILENDCLVPYESHRLNNSYDTNLNRDSTNNRSPRSTVARPLPQS
ISLPNSVGASLTDSSVTTTSRHSEIAASNSRESMREDGNVITL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcagcaccatcagcaccatcagcagcagcagcatcatcagcttcttgcgcag
cagcaggatagcagcagcaacagcagcagcagcgtcatcctcatcaacagcagaccaacc
agcaggatgtcgaggcagcagcagcaacatcagcagcagcatcttcagcagcagcagcag
cagcagcggacgtcgctgaaactctacaacactgtggtggaggtcaagagcaaatttgag
gcagagtaccgtcgctttgctctgaagaggaacggtccagacggtttccaggagttctac
cacctcctccagactattcatcacatccctggggttgacgtgatcctgggatatgccgac
gtccaaggggacctcctcccgatcaacaacgacgacaacttccacaaggctgtgtcctca
gccaatccgctgctccgtatcatcataactaagagagaggatgaacctgttgtatttgga
accaactccctccagaggcgtaaaaagggtctgggcttaactggactgcgccccaccgga
tcgggctccacccactcaaagaacaaaccgggccttatgattgggctcccgcagaacttc
cggcagatctcgtccatcattgacgtggacattttaccagagacgcacagacgcgtgcgg
cttcacaagcacggtacccacaaaccactgggcttctacatccgcgacggggtgagcgtg
cgcgtggcgccgcagggcgtggagaaggttcccggggtgttcatatctcgtctggtacgc
ggtggactggcggagagcacggggctgctggctgtcaacgacgagatccttgaggtgaac
ggcatcgatgtagcgggaaaatctttggaccaggttacagacatgatggtggccaacagt
cacaacctcattgtgactgtgaaaccagcgaaccagaggaacaacgtggtgcatcgtggg
agtaaaacctcaatgggaaactctggttctgtgggctcagctggatcgacgggctcggct
ttgtcacatgactcgccgagccccgcctctcagagcaaccccattaccgcaagcaacagc
atcgcagagggcgacagcgacgacgacgacgacgacgacggcgacctcatcctggagaac
gactgcctggtcccgtacgagtcccaccggctaaacaacagctacgacacaaacctcaac
agagactcaacgaacaaccggtcgccccgctccactgtggcgaggcccctcccacagagc
atctcgttgcccaacagcgtcggggcgtctctgactgacagctcggtgacgacgacgtcc
agacacagcgagatcgcggccagtaacagtcgagagagcatgagagaggacggcaacgtg
ataacactgtag
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