Solea senegalensis (Senegalese sole): 122776475
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Entry
122776475 CDS
T07721
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122776475 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122776475 (lrrc4ca)
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
NGL family
122776475 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Ig_6
DUF4293
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
122776475
NCBI-ProteinID:
XP_043892974
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All DBs
Position
LG10:complement(18287635..18383309)
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AA seq
648 aa
AA seq
DB search
MLNNMTSSQQQQMMRGPRWNRALSDPLLVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSSAELKCKASSLTSVSWITPNGSIMTHGAYKVRLSVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTIVQQKVGP
TPSAGIWESVSATSTTTTTFRTPLSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaatatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgcttgtgctgcttctggccctccagctgctcgtggtggca
gggctggtacgtgctcagacgtgcccctccgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcactcgccgaggcctgcgggacgtccctgatggcatctctactaatacacgc
tacctgaatctgcaggaaaatctcattcaggtcataaaggtggacagcttcaagcatcta
agacatctggagatcctgcagctgagcaaaaaccacatacgcaaaattgaactgggggcc
ttcaatggactggccagtctcaataccttggagctttttgataaccgcctcaccaccatc
ccaaacggggcatttgagtacctgtccaaactaaaggagctttggctgaggaataacccc
atagagagtattccctcctatgctttcaacagagtgccatcattacgccggttggacctt
ggggagcttaaaaggctctcctatatttctgagggcgcctttgaagggctgagcaatctg
cgctacttaaatctcgggatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcagggaaccagctatctgtcatccggcccggctctttt
aaagggctcatccacttacaaaagctatggatgatgcatgcacagatccagaccatcgaa
agaaactctttcgatgacctgcagtcgctggtggagctcaatctagcccacaacaacctc
accctcttgccccacgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacattctctggctaagctggtggcttaaggagatg
gtacctgcaaacactagctgctgcgcacgctgtagctcaccgacccaccacaaagggcga
tacattggcgagttggaccagaactactttcactgttatgctccggttattgtggagccc
cctgcagacctaaatgtgacagagggaagctctgcagagttgaaatgcaaagccagttct
ttgacctctgtgagctggattacacccaatggttccatcatgacgcatggcgcgtacaag
gtcagactctcagtgctgaatgatggcacgctgaacttcactaacgttaccatgcaggac
acgggcacatacacatgtatggtcagtaattcggcgggtaacacgacagcatctgccacg
ctcaacgtgtcctccacggagaacagcagcttcagctacttcaccacagtaacagtggag
accatagaaacgccacacaatgaaggcttcaccactatcgtgcaacagaaggtgggcccc
accccctctgctggtatatgggagtctgtttcagccacctctacaacaaccaccacattt
cggaccccactctccacccgggccacggagaagacttacacaatccctgtcacggagctg
ggtggggagggttcacttaacggcttggatgaggtgatgaagacaaccaagatcatcatt
ggctgctttgttgcaatcacacttatggcagctgtcatgctgattatcttctacaagatg
cgcaaacagcaccaccagcagaatcaccacgcacccacgcgcactattgagatcatcaat
gtggatgaggactgtgttacgggaggcccaggcatggagggccacctcactctgcctcct
cttgagcacgagcacctcaaccactacaacacctacaagactgcatacaaccatgcctct
actatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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integrated database retrieval system
