KEGG   Solea senegalensis (Senegalese sole): 122776664
Entry
122776664         CDS       T07721                                 
Symbol
tnnc1a
Name
(RefSeq) troponin C type 1a (slow)
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04020  Calcium signaling pathway
ssen04260  Cardiac muscle contraction
ssen04261  Adrenergic signaling in cardiomyocytes
ssen04814  Motor proteins
ssen04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    122776664 (tnnc1a)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    122776664 (tnnc1a)
   04820 Cytoskeleton in muscle cells
    122776664 (tnnc1a)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    122776664 (tnnc1a)
   04261 Adrenergic signaling in cardiomyocytes
    122776664 (tnnc1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssen04812]
    122776664 (tnnc1a)
Cytoskeleton proteins [BR:ssen04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     122776664 (tnnc1a)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EF-hand_4 SPARC_Ca_bdg DUF1707 DUF5580_M RNA_pol_Rpb4 Dak2 DUF5390 EMG1
Other DBs
NCBI-GeneID: 122776664
NCBI-ProteinID: XP_043893233
LinkDB
Position
LG11:3521213..3525645
AA seq 161 aa
MNDIYKAAVEQLTDEQKNEFKAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELAELFRMFDKNADGYIDLDELKMM
LESTGEAITEDDIEELMKDGDKNNDGKIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaacgacatctacaaagcagcggttgagcagctgactgacgaacaaaagaatgagttc
aaggcagcctttgacatcttcgtacaagatgcagaggacggctgcatcagcaccaaggag
ctggggaaggtgatgaggatgctgggccagaaccccacgccagaggagctgcaggagatg
attgatgaagtggatgaagacgggagcggcacggtggatttcgatgagttcctggtcatg
atggtgcggtgcatgaaggacgacagcaaggggaagacagaggaagagctcgccgagctt
tttcgcatgtttgacaaaaatgcagacggctacattgacctggacgagctgaaaatgatg
ctggaatctacaggagaggcgataaccgaggacgacatcgaggagctgatgaaagacggg
gacaagaacaacgacggcaaaattgactacgacgaattcttggagttcatgaaaggcgtg
gagtaa

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