Solea senegalensis (Senegalese sole): 122776765
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Entry
122776765 CDS
T07721
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssen01001
]
122776765 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122776765 (prpf4bb)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122776765 (prpf4bb)
Protein kinases [BR:
ssen01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
122776765 (prpf4bb)
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122776765 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
122776765
NCBI-ProteinID:
XP_043893400
LinkDB
All DBs
Position
LG1:complement(27169677..27178129)
Genome browser
AA seq
1016 aa
AA seq
DB search
MADVEMDITSSRMNNGNEHVKQDLESHEQSGNEDSGDVSEEEEEEEEEAETNGEKTEEGP
KHHSSSGKHKRKKHKHRSKHKKHKHASDEDKDRKRRHRHKHRKHKRKEGSSPTGAALFAS
SSHKKVESSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYNSG
SEEDGDARVRNGEQRQRGNSGKPISPRGGKSGKSRRDSTEGSKSSSKRRSRSKSADRPAK
EPKQEKVTKSTKDTGVKDRGRGRSRSKDRKRSDSTDRSKERRKSNSPSSWKVEQKASRTD
KRSSPQRDDRPNQERAPRRSRSPGRERPSRSEVDRDKRPTKSPSKDASSGKENRSPHRRP
PHSPVRKRSASPRHRDTRHPSASATDRIAKQSQSPSRTRSSPRRGRSRSPDSRRRDADRQ
DSPLRKRPRPDLGPRDRSRENSPRASSRRRMSRSPLRRRSPSPRRHSRSSPRRRSRSPLR
HRSGERDRYGRLRQYRRSMSRDRERRRRRSRDEDKFKGSLSEGMKVDQESSEGEVLEDFD
GEEVDEEALIEQRRQQRLAIVQKYRVGNDDSNMVSEPSSPQSSTRSRSPSPDDILERVAA
DVKEYERENLNTFEANIKAKHNLIPQEKDGANPKKPSAPDMFTESDDMFAADFDSARMRA
AGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARGG
QEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLS
MNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILK
LCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILFPG
SSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTINP
TKDLLTDMIGGQRLPEDQRKKVMQLKDLLDGTLMLDPAKRISINQALQHPFIQEKI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtagagatggacataacgtccagcagaatgaataatggcaacgaacacgta
aaacaagatctggaaagccatgaacaaagtgggaatgaggacagtggagatgtatctgaa
gaagaagaggaggaagaggaggaggcagaaactaatggcgaaaagacggaagaagggccc
aaacatcacagcagcagtggcaaacacaagaggaaaaaacacaagcatcgtagtaagcac
aaaaaacacaaacatgcctcagatgaggacaaggaccgcaaacgcagacatcgtcataaa
cacaggaaacacaaacgcaaagagggctcctctcccactggtgctgctctctttgcctcc
tccagccacaaaaaagttgaatcttctccctcctctggaaatccaagtctggatgatagg
gccttactggaggacttggagaaacagagggccatgatcaaagcagagctggacagccag
ttaatggaagggaaggttcagtctggaatgggcttgatccttcagggctataactctgga
tcagaagaggatggagacgcaagggtacgaaatggagaacagcgtcaaagaggcaattca
ggtaaacccatatctcccagaggaggaaaaagtgggaaatcgagacgggactcaactgag
ggcagtaaatccagctccaagcgtcgtagtcggagtaaatctgcggacagacctgctaag
gagcctaagcaggaaaaggtgaccaaaagcaccaaggacacaggtgtaaaggacagaggt
cgtggcaggagcaggtcaaaagacagaaagcgttcagatagcactgataggtccaaggag
agaaggaagtccaactctccctcttcttggaaagtagaacagaaagccagccgcactgat
aaacgttcctctccacagcgggacgatagaccaaaccaggaaagagcaccccggagatcc
agatcaccaggacgagagcgaccgagtcgctcagaagttgaccgcgacaagcggccaacc
aagtctccatccaaggatgcttcatcagggaaagagaaccgttcccctcacagacggcca
cctcacagtcctgtgaggaaacgcagtgcttcccctcgccacagagacacgcgccacccc
tcggcgagtgccacagacaggatagcaaaacagagccagtctccctccagaacaaggtcc
tcacccaggagaggtcgcagtcgctcaccagattccagaaggagggatgctgacaggcag
gactcaccgctaaggaaacgccctcggccagacttggggccgagagacagatcacgggag
aacagtccaagagcatcttctcgccgcaggatgagtcgatcacctctgagacgcaggtcc
ccatcaccacgacgacactcccgctcttcaccacgcagacggagcaggtctccactgaga
cacaggtctggagagagagacaggtatggaaggctcaggcaatatcggcgctccatgtcc
cgtgatcgggaaaggaggaggaggcgcagcagagatgaagacaagttcaagggcagcctt
tcagagggcatgaaagttgaccaggaatcctcagagggagaagtgttggaggattttgat
ggtgaggaagtagatgaagaagctctcattgaacagcgccggcagcagcgcctggccatt
gtccagaaatacagagtcgggaatgatgacagcaacatggtgtcagagcccagcagcccg
cagagcagtactcgcagccgttcaccctcacctgatgacatcctcgagcgagtggctgcc
gatgtcaaggagtacgaacgcgagaacctcaacaccttcgaggccaacatcaaagccaag
cacaacctcatcccccaggagaaagatggagccaatccaaagaagccctcggcccccgac
atgtttacggagtcagacgacatgtttgccgctgactttgatagtgccaggatgagagca
gcaggtgtcggaaaagactttaaagaaaaccccaacctcagggacaactggactgatgct
gagggttactaccgggtgaacattggggagacgctggacaagcgctatgatgtgtatggc
tacactggccagggtgtgttcagcaatgtcatcagagccagggacactgcgaggggcggc
caggaggtggcagtcaagatcatccgaaacaacgagctcatgcagaagactggtttgaaa
gaactggagttcctcaaaaagctgaatgacgcagatcccgatgacaagttccactgcctt
cgccttttcagacacttctatcacaagcagcacctgtgtctggtatttgagcctctcagc
atgaatttgcgagaggtgctgaagaaatacggcaaagacgttgggctccatatcaaggct
gtgcgctcgtacagccagcagctcttcttggccctgaagctgcttaaaagatgcaacatt
ctccacgctgacatcaagccagacaatatcctggttaatgagtcaaagaccattctgaag
ctttgtgactttggttctgcatcccatgttgctgacaacgacatcacaccatacctggtc
agcaggttctacagagctccagaaatcatcatagggaaaccgtacgactatggcatcgac
atgtggtctgtcggctgcactttgtacgagctctacaccggcaaaatcctgtttcctgga
tcttccaacaatcacatgatcaaactcgccatggacctgaagggcaagatgcccaacaag
atgatccgtaaaggtttgttcaaagaccagcacttcgatcagaatttgaacttcctctac
attgaagtggacaaagtaacagaaagggagaaggtgacggtgatgagcaccatcaacccc
accaaagatctgctgacggacatgatcggaggccagcggcttcccgaggaccagaggaag
aaggtcatgcagctgaaggacctgctggacggcacgctgatgctggacccggccaaacgc
atcagcatcaaccaggctctgcagcatcctttcatccaggagaagatttaa
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