Solea senegalensis (Senegalese sole): 122776975
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Entry
122776975 CDS
T07721
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122776975 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122776975 (hnrnpa1b)
03041 Spliceosome [BR:
ssen03041
]
122776975 (hnrnpa1b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122776975 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
122776975 (hnrnpa1b)
Spliceosome [BR:
ssen03041
]
Common components
Common spliceosomal components
hnRNP proteins
122776975 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
RRM_3
Motif
Other DBs
NCBI-GeneID:
122776975
NCBI-ProteinID:
XP_043893758
LinkDB
All DBs
Position
LG11:complement(10130705..10134353)
Genome browser
AA seq
351 aa
AA seq
DB search
MSMSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEKWGSLTDCVVMRDPTTKRSRGFGF
VTYSSVKEVDDAMEARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEES
HLRDYFLRFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDAVDRIVIQKYHTINLHNCEVRK
ALTKQEMQNTGMGMRGRSTGGGRPYDYDRGFNQSGGGGGGGGGGGRGRYGDGPYNCNGGD
GGYGGGGPGGPGGYNNGGNRGYNQGYNQGGGGGGYGGNGYDNGYGNCGGGGGGGGGGNYN
NMGHYDPQASNFGPMKNNFGGGGGGGGSRNFGGYGGGGGSSNGGYGRQGRF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaaagatgttccacgtgagccggaacaactgcgcaagctgtttatcggg
gggttgagcttcgagaccacagacgagagcttgcgggcccattttgagaaatggggcagc
cttacagattgtgtggttatgagggacccaaccaccaagaggtccaggggctttgggttt
gtaacctactcatcagtaaaagaagttgatgatgctatggaagctcgtccccataaggtc
gatgggagagtggttgagcccaagcgtgccgtttccagagaggactctaaccgtccaggt
gcacatgtaacagtcaaaaagatatttgttgggggcatcaaggaggatacagaggagtca
catctgcgagattatttcttgcgttttggcaaaattgaagtaattgatatcatgacagat
cgcaacaccggcaagaagaggggctttgcctttgtcacatttgatgatcatgatgccgtc
gacaggatagtcattcagaaataccacacaatcaaccttcacaactgtgaagtgaggaag
gccctaacaaagcaggaaatgcagaatacaggaatgggtatgagaggccgcagcactgga
ggtgggaggccatatgattatgatagaggcttcaaccagagtggtggcggcggtggtggt
ggcggcggaggtggtaggggtagatatggagatggtccttataattgcaatggaggggat
ggtggctatggaggaggtggtcctggtggtcccggaggatataataatggtggcaatcgt
ggttacaaccaaggttacaaccagggtggtggcggcggaggctatggaggaaatggatat
gacaatggttatggtaactgtggcggcggtggtggtggcggcgggggtggtaactataat
aacatgggccactacgacccccaggcctctaactttggccctatgaagaacaactttgga
ggcggcggcggtggtggtggcagccggaactttggtggctatggtggtggtggtggctca
agtaatggtggatatggccgtcaaggacgattttga
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