Solea senegalensis (Senegalese sole): 122777069
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Entry
122777069 CDS
T07721
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122777069 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122777069 (scn8aa)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122777069 (scn8aa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
GPHH
HpsJ
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
122777069
NCBI-ProteinID:
XP_043893968
LinkDB
All DBs
Position
LG11:13070548..13113957
Genome browser
AA seq
1967 aa
AA seq
DB search
MAAPLLAPGPHSFKKFTVESLATLEQRINEEKNKKPPKQDSSYHDDDDENKPKPNRDLEA
GKSLPYIYGDIPRGMVAVPLEDLDPYYQNTQKTFIVLNKGKTIFRFSATPALYFISPLNL
VRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICAR
GFCIDGFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPIDMNQSVLANGSKGF
DWGEYIMNDANFYFLPGQLDALLCGNSSDSGHCPEGYLCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAAQKEEEFKAMLEQLRKQQEEAQTAAMATSAGTVSEDAVEDDGGGGRLSCSSSEMS
KLSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSDSDDGSKRSRFRFPDNRLGRKSSIM
NQSLLSIPGSPFLSRHNSKSSIFSFKGRSKDVGSENEFADDEHSTVEECEERRGSLFSPY
RRSSYSGYHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAATDDSPTTEVEVKKKLSG
SLMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECCPI
WIRIKEIMNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGDFEDMLSVGNLVFTGIFAG
EMLFKLAAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIDRDCELPRWH
MNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLVVFMMVMVIGNLVVLNLFLALLLS
SFSADNLAATDDDGELNNLQISVIRIKKGIAWIKAKMRVLVASLLKKPPMEDEQKPLDDM
YDKKLNCIANHTGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVP
IAVGESDFENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYMEP
EACWTDACVAKYKCCDVDITMGWGKLWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAF
EDVYIEQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIV
SLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKYYYCFNETAEAYFSVEDVNNKSECEALINLNHTEVRWKNVKINFD
NVGAGYLALLQVATFKGWMDIMYAAVDSREVEHQPDYEVNIYMYIYFVIFIIFGSFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFD
FVTQQVFDISIMILICLNMVTMMVETDDQSNETEDILYWVNFIFIVVFTTEFLLKLFALR
HYYFTNGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMII
LFMITTSGGWDGLLLPILNYPPDCNPNLENPGTNVKGNCGNPSVGIFFFVMYIIISFLIV
VNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLPDFADALEH
PLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAAN
PSKVSYEPITTTLRRKQEDVSARIIQNAYRAHLIRRGIIFKRHTFTNNKLENGGTNQEKK
ESTPSTASLPSYDSVTKPDKEKQDENKEDFSRKEKDKNQKDEWESKC
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccaggacctcatagcttcaagaagtttactgtggaatct
ttggcgactctcgagcagcgcatcaatgaggagaagaacaagaaaccacccaagcaggac
agcagctaccacgacgacgatgacgagaacaagcccaagcccaacagggatctggaggct
gggaagagcctgccctacatctacggagacatccctcggggaatggtggcggtaccactt
gaggatctggacccatactaccagaatactcaaaaaacgtttatagtgctaaataaaggg
aagacaatcttccgttttagtgccacacctgccttgtacttcataagtcctttaaatctg
gttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatgtgt
actatcctgaccaactgtatatttatgacctttagtgatccgcctgagtggtcaaagcaa
gtagagtacacgttcacaggaatttatacgtttgagtctcttgtaaaaatctgcgcacga
ggattctgtatagacgggtttacgttcttaagagatccatggaactggctggatttcatg
gtcatttccatggcatatgtaacagagtttgtggacctgggcaatgtatctgcgctgaga
acattcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagaccatt
gtgggtgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgactgtcttc
tgcctgagcgtctttgccctcatcggtctccagctcttcatgggcaacttgcgccaaaag
tgtgtgatctggcccatcgacatgaaccagtccgtcctggccaacggcagcaagggcttc
gactggggcgagtacatcatgaacgatgccaacttctacttcctgcctggtcagttggac
gctcttctctgtgggaacagctctgactctggccactgcccagagggctacttatgcatg
aaagctgggaggaatccaaactatggctacaccagctttgacagcttcggctgggccttc
ctggctctcttccgacttatgacacaggacttctgggaaaacctttacatgctgacattg
agggcagcagggaagacctacatgatcttctttgtcctggtcatctttgtgggatctttc
tacttggtgaatctgatcctggctgtggtggccatggcttatgaggagcagaaccaggcc
accatggaggaggctgcgcagaaagaggaggaattcaaggccatgcttgagcagctcagg
aaacaacaggaagaagcccagacggctgccatggcaacatctgcaggcacagtgtcggag
gatgcagtagaggatgatggtggaggagggcgtctctcatgcagttcatccgagatgtca
aaactcagctctaagagtgccaaagagcggcgcaaccggaagaagaaatggcgacagaaa
gagcaggagaaggagaaaggcgacagcgagaagtttgtcaagtcggactcggatgatggc
agcaagcggagccgcttccgtttcccggataacaggctgggtcgaaagtcttccattatg
aaccagtccctactcagtatccctggctcgcctttcctgtctcgccataatagcaagagc
agcatcttcagtttcaagggccgcagtaaggacgtcggttcagaaaacgagtttgccgat
gatgagcacagcacggtggaggagtgtgaggagcgccggggttccctgtttagcccatat
cggcggagcagctacagcgggtaccatgggaagaggaacagtacggtggattgcaatggc
gtggtgtcactcatcggccctgggcctggtggacgccttctgcctgaggtgaaaatagat
aaggcagccactgacgacagtccaactactgaggttgaggtgaagaagaagctgtcgggc
tccctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaac
agtgtcatgagcgtcattaccaacacattagtggaggaactggaggagtctcagcgcaag
tgtccgccatgctggtataagttttctaacacattcctgatctgggagtgctgccccata
tggattaggatcaaggagattatgaatctgatagtcatggacccctttgtggacttagcc
atcaccatctgcattgttctcaacaccctcttcatggccatggagcactaccccatgaca
ggcgactttgaagatatgctgagtgtgggaaatctggtgttcaccggaatctttgcaggg
gagatgctttttaagctggcggccatggatccatactactactttcaggaggcctggaac
tgttttgacggtttcattgtgacgctgagtttagtggagctggctctggctgacgttgaa
ggcctgtctgtattgcggtctttccgattgctgagagtgtttaagttggccaagtcatgg
cccaccctcaacatgttgatcaagatcatcggtaactcggtgggagccctggggaacctg
actttggtgctggccatcatcgtcttcatctttgctgtggtgggcatgcagctgtttgga
aagagctataaagactgtgtgtgtaagatagacagggactgtgagctcccccgctggcac
atgaatgacttcttccactccttcctaatcgtcttccgggtgctgtgtggtgagtggatt
gagaccatgtgggactgcatggaagtggctggccaggccatgtgcctcgtcgtcttcatg
atggtcatggtcattggcaacctggtggtgttgaacttgttccttgccttgctgctgagc
tctttcagcgctgacaacttggctgcgacagatgatgacggtgagctcaacaacctgcag
atttcagtaatacgcatcaagaaagggattgcgtggataaaagcaaagatgagggtactg
gtggccagtctgctgaagaaaccgccgatggaggacgagcagaagcctttggatgacatg
tatgacaagaagctgaactgcattgctaatcacactggggtggacatcaaccgtgacctg
gactatgccaaaaatggcaatggcaccaccagtggtattggcagcagcgttgggaagtat
atgatagatgaggaccacatgtctttcattcacaatccgaatctgaccgtctgcgtgccc
atagctgtgggagagtcggattttgagaatctcaacacagaggacttcagcagtgaatca
gaaaatgagaatagcaaagagctggatgacaccagttcgtcagaaggcagcaccatcgac
atcaagccagatgtggaggaggtggtggtggttgagacagtggaggaatacatggaacca
gaggcgtgttggacagatgcttgtgtggccaagtacaagtgctgtgacgttgacatcacg
atgggctgggggaagctctggtggttcctgagaaaaacctgctacctgattgtagagcac
aattggtttgagaccctcatcatcttcatgatccttctcagtagcggtgccctggccttt
gaggatgtgtatatcgagcagaggaagaccattcggatcattttagagtatgctgacagg
gttttcacctacatcttcatcctggagatgttgctgaaatgggtcgcctatggttttgtc
aagtacttcacgaatgcctggtgctggctggacttcttcattgtggatgtgtctatagtc
agccttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggaca
ctaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtc
aacgccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttt
tggctgattttcagtatcatgggtgtcaacctgtttgcggggaagtactactactgtttc
aatgagacagccgaggcgtacttttctgttgaagatgtcaacaacaagagcgagtgtgag
gccctcattaacctaaaccatactgaggtcaggtggaagaacgtcaaaatcaactttgac
aatgtgggcgccggctacctggcactgctgcaagtggccacgttcaaaggctggatggac
attatgtatgctgctgtggattccagagaggttgaacaccaaccagactacgaggtcaac
atctacatgtacatctactttgtcatatttatcatcttcggctccttcttcacccttaat
ctcttcattggtgtgattatcgacaacttcaaccagcaaaagaaaaagtttggaggtcag
gatatcttcatgacagaggaacagaagaagtactacaatgccatgaaaaaactgggctcc
aaaaagccacaaaaacctattcctcggccacagaataagatccagggaatggtgtttgat
tttgtgacacagcaagtttttgacatctccatcatgatcctcatctgcctcaacatggtc
accatgatggtggaaacagatgatcagtcaaatgaaacagaggacatcctctactgggtc
aacttcatcttcatcgtagtcttcaccacggagttcctgctcaagctctttgcccttcgc
cactattacttcaccaatggctggaatatctttgatgtggtggtggtcatcctgtctatt
gttggtatgttcttggctgacatcattgagaaatactttgtgtcacccaccctattcaga
gtgatcaggctggctcgtattggacgtatcctccgtctgatcaaaggagctaaaggcatc
cgaacattactcttcgctctgatgatgtcactgccagccctgttcaacatcggcttactg
ctcttcctcgttatgttcatcttctccatcttcggcatgtccaactttggctatgtaaag
catggcgcaggcattgacgacttgtataactttgagaccttcggcaacagtatgatcatc
ctcttcatgatcactacatcaggtggatgggatggcttgttgctgccaatcctcaactac
ccaccagactgcaaccccaacttggagaaccctggtacaaatgtgaagggtaactgtgga
aatccctcagtgggaatcttcttttttgtcatgtacatcatcatttctttcctgattgtg
gtcaacatgtacattgccatcatcttggagaacttcagcgtggccacagaggaaagtgct
gacccactgagtgaggatgactttgagaccttctacgagatctgggagaagtttgatccc
actgcctctcagtttattacttttgccaagcttcctgactttgccgatgcactggagcac
ccactccgagtgccaaagcccaacactatagaactaattgccatggacatgcctatggtg
agtggcgatcgcatacactgcctggacatcctgtttgcattcacaaagcgtgtactgggt
gacagtggtgagctggacatgctgaggcagcagatggaagagcgatttgtggctgccaac
ccctccaaggtgtcatacgaacccatcaccaccactctccgccgcaaacaggaggatgtc
tctgccagaattattcagaatgcataccgcgctcacctcatcagacgtggcatcatcttc
aagcgccacacttttactaacaataagcttgagaatggtggtaccaaccaagagaagaag
gagagcacaccttccacagcctctctcccctcttacgacagcgtgaccaaacctgacaag
gaaaagcaggacgaaaacaaggaggatttttccagaaaagagaaggacaaaaaccaaaaa
gatgagtgggaatccaagtgttag
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integrated database retrieval system
