Solea senegalensis (Senegalese sole): 122777144
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Entry
122777144 CDS
T07721
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122777144 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122777144 (dcp1a)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122777144 (dcp1a)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122777144 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
122777144 (dcp1a)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122777144 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
122777144
NCBI-ProteinID:
XP_043894098
LinkDB
All DBs
Position
LG11:15327577..15336678
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AA seq
503 aa
AA seq
DB search
METVNAGHMMSLAALQRQDPYINKLLDVTGQVALYNFNSKANEWEKTDIEGTLFVYTRSA
SPHHGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKSDCQRIAQL
MVKIVKQEADHAQRDSPERAELGTTNGIAEPRPIDILELLSKAKEEYQRTQTCETDGSTG
SHVKAAMSDTERTHSTPQLEKSSHTVVKQITVEELFGSSLPKDPSLPAMPAQNTISASSD
FSAAFTQNQSYTTSAHQNSISNQQHQVPGLLPAPYTLHPSPVFQSVIPMSDPQPRCSVSP
FMVPPPGSEPRAAPPGPAAPAAPSGAYLGQEILNTLKPAVSSVNSDIHKPILAPSFLPST
LVPPHSFQEPMGKPLPQQSKEVDVFSPPQNLIKPMSAVPMSPGLAVPGPELSVLLSPSAF
QQSSSKKTTSGAAAAAASSVVLSTPPEPSTTVVGGVEPPPAPCSKTQLQETLIHLIKNDP
DFLSAIHDAYLQTLSKDLGSMKL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtaaatgctggacatatgatgagcttagcagccctacagagacaggacccg
tatataaacaagctactcgatgtcactggtcaagtggctctttacaactttaactccaaa
gcgaacgaatgggagaagaccgacatcgaaggcacattgtttgtgtataccaggtctgcc
tcccctcatcatggcttcaccatcatgaaccgattgagcacagagaacctggtagagcct
atcaacaaagacctggagttccaactgcaggatccctttctgctctacaggaatggcaac
ttgggtatctacagtatttggttctatgacaagagcgactgtcaacgtattgctcagctg
atggtcaagattgtaaagcaagaagcagaccatgcccagagagattcacctgagagggca
gagctggggacgaccaatggcattgcagagccacgacccattgacatcctggaactactc
agtaaagccaaggaagaataccagagaactcaaacatgtgaaacagatggttctacaggg
tcacatgtgaaagcagctatgagtgatacagaaagaacccacagcacaccacaactagaa
aagagctctcacacagtggtgaagcagatcacagtcgaggagctatttggctcatctctc
cctaaagatccctctctacctgccatgcctgcacagaacaccatcagcgcttccagcgac
ttctccgctgccttcactcagaaccagtcttataccacttcagctcatcaaaactccatc
tccaaccagcaacaccaagtccctggcctgctcccagctccttatacactgcatcccagc
cctgttttccagtcagttatcccaatgtcagacccccagcctcggtgctcagtttcacct
ttcatggtacctccgcccggctcggagcctcgtgctgctccccctggtcctgcagcacca
gcagcaccgtctggagcttatttggggcaggaaatactcaacacactcaaaccagcagtg
tcatctgtgaattcagacattcacaaaccaatccttgcacccagctttctgccaagcact
ctggtccctccccacagcttccaggagcccatgggaaaacctcttccccagcaaagcaaa
gaggtcgatgttttctctccgcctcaaaacctgatcaagccaatgtctgctgtccccatg
agtccaggccttgctgttccaggacctgaattgtccgtgcttctctctcccagcgccttt
cagcagtcaagtagtaagaaaacaacaagcggagcagcagcagcagcagcatcatcagtg
gtcctttcaactccacctgagccctccactactgttgtaggaggtgtagagcctccgcca
gccccatgcagcaaaacacagctacaggagacactgatccacctcataaagaatgaccca
gacttcctcagtgccattcatgatgcttacctgcaaactctgtccaaggacttgggcagc
atgaagctatag
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