Solea senegalensis (Senegalese sole): 122777191
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Entry
122777191 CDS
T07721
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03030
DNA replication
ssen03410
Base excision repair
ssen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122777191 (zgc:110269)
03410 Base excision repair
122777191 (zgc:110269)
03450 Non-homologous end-joining
122777191 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssen03032
]
122777191 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122777191 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122777191 (zgc:110269)
DNA replication proteins [BR:
ssen03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122777191 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122777191 (zgc:110269)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122777191 (zgc:110269)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122777191 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
122777191
NCBI-ProteinID:
XP_043894189
LinkDB
All DBs
Position
LG1:complement(8626251..8630756)
Genome browser
AA seq
348 aa
AA seq
DB search
MGITKLADLIRFNAPDAICHKDISDYTGKVIALDTSIVVNQFRAATPTLSPLTGLFFRTL
TLLEHDIKPVFVFDGKPPEEKSAVLEKRAETSGWKSSNRTGTVSSQTKDCLHLLKLLGVP
FIQAPGDAEALCAQLERDGTVDAVASEDMDTLPFGANVLIRQLNAKRDSEVVEYSLPKVL
EKLQISHEEFVDLCILLGCDYCDKITGLGPKKALTLIQKHRKIENVVVHVNKQTHPIPHF
WKYKEARKLFLAAPQTVAPELAWTEPDEEALVGFLCHTKRVKVERVRHRMEKFRQKRESR
RNEREKERALGSCRQTQIMDFFRVTRKREQPVEATEPLRNKRKKPNST
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggatcacgaaactggcagatctgatccgcttcaatgctcctgatgccatttgtcac
aaagacatcagtgactacacaggaaaagtgattgctctggatacgtctattgttgttaac
cagttccgtgcagcaacacccactttaagccccctgacaggtctcttcttccgcacactc
accctcctggagcatgacataaaaccagtctttgtgtttgatggaaagcctccagaggag
aagtctgctgttcttgagaagagagctgagacatcagggtggaaatcctccaaccgcaca
ggcacagtttcatctcagaccaaggattgtctccatctcttgaagcttcttggtgtacca
ttcatccaggctccaggagatgctgaggcactgtgtgcccagctggagagagacgggact
gtggatgcagtggcatcagaagacatggacaccctgccattcggagccaatgttcttatt
cgtcagttgaacgccaaaagggacagtgaagtagttgaatattctttacccaaagtactg
gagaaactccaaattagtcacgaggagtttgttgacctgtgtattttgttgggctgtgac
tactgtgacaagataaccggtttgggacctaagaaagctctgactctgatccagaagcac
cgtaagattgagaatgtggttgtgcacgtcaacaaacagacccatcctattccacatttc
tggaagtacaaagaagcacgcaagttattcttggctgcaccacagaccgttgcacctgag
ctcgcctggacggaaccagacgaagaagccttggttgggtttctctgtcacaccaaacgt
gtgaaggtggagcgagtccgtcatcgaatggaaaagttccgtcagaagcgggaaagcagg
cggaatgagcgagaaaaggaaagagcgctgggttcctgcaggcaaacacaaataatggac
ttcttcagagttaccaggaagagggaacagcctgtggaagctacagagccattacgcaac
aaaagaaagaaaccaaattcaacatga
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