Solea senegalensis (Senegalese sole): 122777226
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Entry
122777226 CDS
T07721
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122777226 (ddx19a)
03015 mRNA surveillance pathway
122777226 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122777226 (ddx19a)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122777226 (ddx19a)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122777226 (ddx19a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
122777226
NCBI-ProteinID:
XP_043894244
LinkDB
All DBs
Position
LG11:8323283..8329893
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AA seq
487 aa
AA seq
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MSQNSWAQAVDVQETTALSVQLDSSKKVQGLYGGRYTRGDVNANIVLEKKENGGRTKDGD
SVDPAEQSLLYKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNMGF
NRPSRIQENALPMMLAQPPQNLIAQAQSGTGKTAAFSLAMLSHVDPANKWTQCLCIAPTY
ELALQIGHVIEQMGTFYPDVQLAYAIRGNRMERGIKLQQQIVIGTPGTVLDWCTKFKHID
PKKITMFVLDEADVMIATQGHRDQSFRIHRQLPKDCQMLLFSATFEDSVWKFAEKVVPDP
NIIKLNREEETLDTIKQFYVVCKQEEDKFIALCNLYGCLTIAQAMIFCHTRRMAAWLAAN
LTQEGHQVALLSGEMTVEQRAAVIERFRDGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DINGNAHNETYLHRIGRTGRFGRKGFAVNMVDSEHSMDIIHQIEMHFNRKIIEIDTSNLE
EMEKLFS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaactcgtgggcgcaggctgtcgatgtccaggagaccacagctctctcagtg
cagttggactcttccaaaaaagtacagggtttgtatggaggacgttacacgagaggagac
gtaaacgcgaacattgtcctggagaaaaaagaaaatggaggcaggaccaaagacggggat
tcggtggacccggctgaacaatccctgctatacaaactgatccgccgctctctggtgcgg
aacagaaaccaggtggaggtccttcagagggacccaacctcccctctctactcggtcaag
acgtttgaggagctgagactgaaacctgagctgttgaagggtgtgtacaacatgggcttt
aacagaccgtccagaatccaggagaatgcattgcccatgatgctggcacagccacctcag
aatctgattgcacaggctcagtccggcacaggtaaaactgctgcgttttctctggccatg
ctcagtcatgtagacccagccaataagtggactcagtgcctgtgcattgcaccaacatat
gagctcgcgctgcagatcggtcatgtcatcgagcaaatgggaacattttatccagacgtg
caacttgcatatgccattcgtggcaacagaatggaacgaggcatcaagctacaacagcag
attgtcattggaacaccaggcacagtcctcgactggtgcaccaagttcaagcacatcgac
cccaagaagatcaccatgtttgtgctggatgaagcagatgtgatgatcgccacgcagggt
catcgtgaccagagctttcgaatccatagacagctaccaaaggactgccaaatgctcttg
ttctctgcaacatttgaggactctgtgtggaagtttgcagagaaagtggttcccgaccca
aatatcatcaagctgaaccgtgaagaggagacgctggacacaatcaaacagttctacgtg
gtctgcaagcaggaggaggacaagttcattgctctttgcaatctctacggatgtcttacc
attgcacaggcaatgatcttctgccacactcgcaggatggctgcttggctagctgcaaac
ctgactcaagagggccaccaggtggcattgctgagtggagaaatgaccgtggagcaaagg
gctgctgtcattgaacgcttccgtgatggcaaggagaaggtgctcgtgaccacgaatgtg
tgctctagaggtattgatgttgagcaggtgtcacttgtggtcaactttgacctgccggtg
gacataaatggaaatgcccacaatgagacataccttcaccggattggccggactggacgc
tttggcagaaaaggatttgctgtcaacatggttgacagtgagcacagcatggacatcatc
caccagattgagatgcatttcaacaggaaaatcatagaaattgacaccagcaatcttgaa
gaaatggaaaagctgttcagttga
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