Solea senegalensis (Senegalese sole): 122777235
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Entry
122777235 CDS
T07721
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122777235 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122777235 (l1cama)
04090 CD molecules [BR:
ssen04090
]
122777235 (l1cama)
04091 Lectins [BR:
ssen04091
]
122777235 (l1cama)
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
L1 family
122777235 (l1cama)
CD molecules [BR:
ssen04090
]
Proteins
122777235 (l1cama)
Lectins [BR:
ssen04091
]
I-type lectins (Siglecs)
122777235 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_2
V-set_CD47
Ig_5
Ig_C17orf99
DUF4064
Motif
Other DBs
NCBI-GeneID:
122777235
NCBI-ProteinID:
XP_043894257
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Position
LG11:10843661..10884034
Genome browser
AA seq
1278 aa
AA seq
DB search
MPHMQRQQVGSRGQCSPHLLLPLLLPLLLLSLAAQPSRAAIHIPSTYHISDLKRPPVITT
QPESVTVFSVEDLVMNCEATGNPPPIFHWTKDGEKFHPGSDPELKVTESTGLFAFYTLSN
TVDTLKQYQGKYVCYASNELGTAVSNEAVLTTDVLPTLQREKKVDVKSEQGNSVVLKCNP
PQSSMEPIIHWMDWRLHHIQLSPRVVVGKDGNLYFAHLTAEDSRDDYICNVQYLATRTIL
AKEPISLSALSSNSVVRNKRPQMMRPTGTRSTYHALRGQTIELECIVQGLPTPDVLWLRK
DGELSESRTAKDMFDRRLRFTNISESDAGEYQCRANNSQGKITHTYTVIVEAAPYWTKEP
VSQLYAPGETVRLDCQADGIPSPVITWTINGNPITANKDSRHTLTASGSLILHDVHFKDT
AIYQCQASNKHGTILTNTNVYVIELPPQILTEDRNAYTYTEGKTALLECETFGSPKPNVV
WESGSIPILADPRVNLLTNGGLEISNLTHDDEGFYTCSVVNTNLSITAELEVLNRTVILS
LPQSLKVQQGHTAIFTCLPQVDPRLDTPLIQWRKNNQKLFQSHIDAKYTFEGPDLIIANV
EPGDEGVYTCQVITKKDMAEASGTLTLCDRPDPPILLEITESKLRTATLIWTPGDDHNSP
VLEFVIEFEDQGSKEKGWEALMRVRGNQEHASLSLWPYMSYRFRVTAINDFGKSDPSKPS
EIHNTLAEAPDNNPEDVRSESIDPDSLVITWEEMSKRDFNGPDFKYRVLWRRVVGSGPKW
NINYTTTTPFIVNDIGNFSAFELKVQAVNDKGAGPEPDPFIGYSGEDVPLEAPMDVGVVI
LNSTTIRVTWAPIERETVRGHLLGYKIYLTRTGSRGHHRGRRAKESENTIVVETEANEEK
KMITDLRPFSHYTLEVTVFNSKGEGPASEMLAFKTHEGVPGPPLSLTLDSPSETEMTLHW
TPPDQPNGILSGYLLQYQRIVETDDSPMQVVTIVDPTVTHLTLTNLDRHSHYQFYLRGRT
ATGDGEPIFREGATTLDGGPPTNFSLSVGENSVNLSWVAKKRHRNVNFQIHYLKKKVDSK
WKKTEEVNSSQSFYQIQGLSPGSHYRLLFIYSNKTYWETDIETEGTEVTEIQQSFATQGW
FIGVVSAIALLLLILLILCFVKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESD
LEEKRTASLPSLCEESKLCSVDNLDFNGSSAITTELNMDESLVSQLSRPSEGPDSSPLNP
TTAPPANNGTTNSVTILD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacatgcagcgacagcaggttggcagtagggggcagtgctcccctcaccttctc
ctccctctcctcctccccctcctccttctatcccttgctgcccagcccagtcgagcagcc
atacacataccctccacctaccacataagtgatctcaagaggcctccggtgatcaccaca
caaccagagtctgtcaccgtcttcagcgttgaagacctcgtcatgaactgtgaagctaca
ggaaaccctccacccattttccactggacaaaggatggagagaagtttcacccaggcagc
gacccagagttaaaggttaccgagtccactggcttattcgcattctacacgctcagtaac
accgtggacactctgaagcagtaccaaggcaaatatgtctgctacgcatccaacgaactg
gggactgccgtctctaatgaggccgtactcaccactgatgttcttccgaccttgcagaga
gaaaaaaaggttgatgtgaagtctgaacagggaaacagtgtagttctgaagtgtaatccc
ccgcagagctctatggagcccatcattcactggatggactggaggctacaccatattcag
cttagcccacgagtggtggtcgggaaggatggcaacctgtactttgcccatttgacagct
gaggacagcagggacgactatatctgtaatgtccagtatctggcaacgcgcaccattctg
gcaaaggaacccatctctctgtctgccctctcttccaactcagtagtgcggaacaagagg
ccccagatgatgagacctacgggaacccgaagcacttaccacgccctcaggggccagacc
atagagcttgagtgcatcgtccaaggccttccaactcctgatgtgctgtggctgaggaaa
gacggtgaattgtctgaatctcgaactgcaaaagacatgtttgaccgccgcctgcgcttc
actaacatctcagagagcgacgcgggagagtaccagtgtagagccaacaactcacaggga
aagatcacacacacctacactgtgattgtggaagctgctccctactggactaaggagccg
gtcagtcagttatatgccccgggtgagactgtgagactggactgccaggctgacggtatc
ccctcccctgtcattacctggactatcaatgggaaccctatcacagcaaacaaggactct
cgacacactctgacagcaagcggatctctaatcctacatgatgtccacttcaaagacaca
gccatataccagtgtcaggcctctaacaaacatggaaccattctcaccaacaccaatgtt
tatgtcatcgagctgccgccacagatccttactgaagacaggaatgcatatacatataca
gagggcaagacagctttgctggagtgtgaaacctttggttcccctaaacctaatgtcgta
tgggagagtggcagcatccccatccttgcagatccaagagttaacctactcacaaatgga
gggctcgagatctctaatctcacccatgatgatgagggcttctacacctgctctgtagtg
aacaccaacttgtcaatcactgcagagctggaggtgctcaacaggacagtgatcctgtca
ctaccacaatctctgaaggtgcagcaaggacacacagcaatcttcacgtgtctgccccaa
gtcgaccccagacttgacactccacttattcagtggagaaagaacaatcagaagctgttt
cagtcccacattgacgcaaaatacacttttgaaggaccagacctgataattgctaatgtg
gaaccaggtgatgagggtgtgtacacctgtcaggtcatcactaagaaggacatggctgaa
gcaagtggcaccctcactttatgtgatcgtccagatcctcctatcctgcttgaaatcact
gagtctaaacttcgtaccgccacactcatctggactcctggagatgaccacaacagtcct
gtgctagagtttgtgattgagtttgaggaccaaggttcgaaggagaagggctgggaagcg
ctgatgagagtaagaggtaaccaagagcatgcgagcctcagtttgtggccctacatgtcc
taccgtttccgcgtcactgccatcaatgattttggcaagagtgaccccagcaagccctct
gaaatacacaacacacttgcggaagctccagacaataaccctgaagatgtcagaagtgag
tccatagacccagactctctggtcatcacctgggaggaaatgagcaaacgcgacttcaac
ggacctgactttaagtacagggtgttgtggaggcgagtggtgggcagtgggcccaagtgg
aacatcaactatacaacaacaacaccattcattgtcaatgacattggcaacttctctgcc
tttgagctcaaagttcaggctgtcaatgataaaggagcgggacctgagccggacccattt
atcggctactcaggggaagatgttccgttggaggctcccatggatgtaggtgttgtgata
cttaacagcacaaccatcagagtgacctgggcaccaatagaaagagagacagtcagagga
cacctgcttgggtacaagatctacttgaccaggactggttccaggggtcaccacagaggc
cgcagggcaaaggagtcagaaaacaccatagtggtggagactgaggccaatgaggagaag
aagatgatcaccgatctccgaccgttctcccactataccctggaagtcactgtattcaac
agcaagggagagggacctgcttctgagatgctggcctttaagacccatgagggagttcct
ggtcctcccttgtccctgacgttggacagcccatcagagacagaaatgactcttcactgg
acgcctcctgaccagcccaatggaatccttagtggatatctgctgcaataccaacggatt
gtggagactgatgacagccccatgcaagtagtgacaatagtggatccaacagtcacccat
ctcaccctgacaaacctggaccgccacagccattaccagttctacctgagggggcgcact
gctactggggatggagagcctatatttagggagggtgccaccacactggatggagggcct
cctacaaacttcagcctgtctgtgggggaaaactcagtgaacctcagctgggtagccaaa
aagagacacaggaatgttaacttccagatccactacctcaaaaaaaaggttgacagtaaa
tggaagaagacagaggaggtgaactcctctcagtctttctaccaaatccagggcctgagt
cctggctctcattaccgtctactcttcatctacagcaacaaaacctactgggagacagac
attgagacagaaggaacagaagtgacagagatacagcaaagcttcgcaacacaaggctgg
tttattggtgttgtgagcgccatcgcgctgctgctgctgatactgctcatcctctgcttc
gtcaagaggagcaaaggggggaagtactcagtgaaagataaagaagaaggccccatggat
tcagaggcgcggcctatgaaagatgagacttttggagagtacagatctctagaaagtgat
cttgaggaaaagcgcacggccagcctgccgtccctgtgcgaggagagtaaactgtgcagc
gtggacaaccttgacttcaatggcagcagtgccataaccacagagctcaacatggatgag
tctctggtcagccaactcagtcgtcccagcgagggtccagacagctcgccactcaacccc
accaccgcccccccggccaacaatggcacgaccaactcagttaccattctcgattaa
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