Solea senegalensis (Senegalese sole): 122777239
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Entry
122777239 CDS
T07721
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04120
Ubiquitin mediated proteolysis
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122777239 (ube4b)
04120 Ubiquitin mediated proteolysis
122777239 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122777239 (ube4b)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122777239 (ube4b)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
U-box type E3
122777239 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
122777239
NCBI-ProteinID:
XP_043894266
LinkDB
All DBs
Position
LG11:13483084..13499307
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AA seq
1184 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLHGPSGAVPQPLQPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSNVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFHRGPKDAFCDFKDLISQILMEVLMMSTQSRVHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSLGGSPMGPSVGSFGASSLSSLGACGGGMSSDSASDRFTIE
TCKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISHVALVLQGTLTQP
RGPHQPSLLVPYMLCRNLPYGFIQELARITHQEEEVFRQIFIPILHGLALAVKECSFDTD
NYKFPLMALAELCEIKFGKTHPVCSLSTSLPLWCPKPLSPGSGREVQRLSYLGAFFSLSV
FAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETRELALN
YMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLA
VSQEETRLKATMEELKSWLSELHEDPTKFSEPKFPTECFFLTLHTHHLSILPCCRRYIRR
LRAIRELNRTVEELKNSESQWKDSSLASRHREMLKRCKTQLKKLVRAKACADVGLLDENL
LRRCLQFYSTVIQLILRMVDPAYPNITLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYS
PQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQSRTQRFSEMMENH
PLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPRDQQQSRQSQLTQD
ERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSI
AIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGKVMDRSIIL
RHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGRPM
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactaagcgcagatgagattcgcagaaggcgactggcacgactggcaggtgga
cagacgtcacagcccagcacccccctcagtacacccttaacatctccacagagagagacc
ccacctggacccctccatggaccctcaggtgctgtaccccagcccctgcaaccagctgcc
tcccagtcattggggctcaatgtccacagtggtactcctgccacttctcctatgggcacc
tctggagtggcatatggtagtcagagcagtgagggtgtcagctccctctccagctcaccc
tccaacagccttgaaacacagtcccagagtttgtcgcggtcgcagagcatggatattgac
actgcctcctgtgaaaagagcatgtcccaggtggacgtggactcagggatagagaacatg
gaggtggaggacagtgatcgcagggaaaaaaggaacttgactgaaaaggaaacctctgca
aactcgaatgtctctgaagagcaggctttgcagcttatttgtaagatcctccgcgtatcg
tggaaggaacaggatagagatgtcatctttctcccgtcactggctgcagagtttcaccgt
ggtcctaaagatgcattttgtgacttcaaagacctcatcagccagatcttgatggaagtc
ttaatgatgtccacccagtcacgtgtccataacccctttgccagcttgactgccacctct
cagccaattgcggcagccaaatccccagaccaccgtctgacgctggtgcagccctccagt
ctaggtggcagtcccatgggtcccagtgtggggtcctttggagccagctctctgtccagt
cttggcgcatgtggagggggaatgtccagcgattcagccagcgaccgcttcacgattgaa
acatgcaaagagacagagatgctgaactacctcatagagcgttttgacagtgttggcatg
gaggagaggaaagctcccaagatgtgcagccaaccaaatgtcagccagcttctcagtaac
attcgttctcagtgtatttctcatgttgctctggttctgcaaggcaccttgacccagcct
cgaggccctcaccaaccgtctctgctggttccttatatgctgtgtcggaaccttccttat
ggcttcattcaggagctggcacgcattactcatcaagaggaagaagtattcagacagatc
ttcattcctatcctccacgggcttgctcttgcagttaaagaatgttcttttgacactgac
aactataaattccccctcatggcattagctgaactctgtgaaatcaagtttggaaagact
cacccagtgtgtagtttgtcaacatcattgcctctatggtgtcccaaaccgctgagccct
ggttccggcagagaggtccagagactgtcttatctgggagccttcttcagcctttcagtt
tttgctgaggatgataccaaagtaggagacaagtatttctcgggcccagccatcaccatg
gagaacacacgagttgtcagtcaatcgttgcaacactacctggagtcagcaagaggtgac
ctgtttaaaattctccataacattctactgaatggagagacacgcgagttagcgctgaac
tacatggcagctctagtcaactacaatgtgaagaaagcccagatgcagaccgatgataag
ctggtgtctactgacggcttcatgctgaacttcttatgggtgctgcaacagctgagcatg
aagatcaaactggagacagtggacccttattacattttccacccacgctgtcgccttgct
gtcagccaagaggaaacacgtctaaaggccactatggaggagctgaagagctggctgtct
gaactgcacgaagacccaacaaagttctcagaacccaagttccccaccgagtgtttcttc
ttgacactgcacacacaccacttgtccatcctaccttgctgcaggcgctatatccgcagg
ttgcgagccatccgtgaacttaacaggactgtagaggagctgaagaatagtgaaagccaa
tggaaagattcttccctggcaagtcgacatagagagatgctgaagcgttgcaaaacccag
ctcaagaaactggtgcgagccaaagcttgtgctgacgtgggtcttctggacgagaacctg
ctgcgcagatgtctgcagttctacagcacagtcattcagctcattctccgcatggtggac
cctgcctatcccaacattaccctgccactgaaccctgagattcccaaaagctttgctgct
cttcccgaattctacattgaagatgtggccgagtttctgctttttgtcgtgcagtattct
ccccaagttttatatgagccgtgtgttcaggacatcgtcaccttcttggtggtgttcatt
tgcagccagaactacatcaggaacccctaccttatcgccaagttagtggaggtgctgttt
gtcaccaaccctgctgtacagtctcgtactcagcgattctctgaaatgatggagaaccac
ccgttgtccatcaaacaactagtccctgccctcatgaagttctacactgatgttgaacat
accggagccaccagcgagttctatgataagttcactatacgttaccatatcagcactatt
ttcaagagtctctggcagaacattgcccaccatggcaccttcatggaagagttcaactct
ggcaagcagtttgttcgctacatcaacatgctgatcaatgacaccaccttcttgttagac
gagagccttgagtccctgaagcgtattcatgaagttcaagaggagatgaagaataaggag
cagtgggagcagctaccgagggaccagcagcagagccgtcaatcccagctgactcaggat
gagcgggtgtctcgctcctatttggccctggccacggagacggtggatatgttccacatc
ctcaccaagcaggtccagaagcctttcctcagacctgagctggggcctcgtttagctgcc
atgctgaactttaaccttcagcagctctgtgggcccaagtgtcgggatctgaaggtggag
aacccagaaaagtacggctttgagcccaagaaactcttggaccagctgacggacatctac
ctgcagctggactgtgcccgctttgctaaagcaattgcagatgaccagcggtcatacagc
cgtgaactctttgaggaggtgatctcaaagatgaggaaggctggcattaaatcctccatt
gctattgaaaaattcaagctgctatcagaaaaggtggaggaaatagttgcaaggaactcc
cagtctgaaatggactacagtgatgcacccgacgagttcaaagacccactgatggacaca
ctgatgacagaccctgtgatattaccttcggggaaagtcatggaccgatccatcatctta
cgccacctgctcaactccccaactgatcctttcaacagacagcctctcacagagagtatg
ctcgagtctgtccctgagctgaaggagaggatccatacctggatgagagagaagcagggt
ggacgacctatgtaa
DBGET
integrated database retrieval system
