Solea senegalensis (Senegalese sole): 122777248
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Entry
122777248 CDS
T07721
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03272
Virion - Hepatitis viruses
ssen04382
Cornified envelope formation
ssen04514
Cell adhesion molecule (CAM) interaction
ssen04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122777248 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122777248 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122777248 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122777248 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122777248 (cldn1)
04147 Exosome [BR:
ssen04147
]
122777248 (cldn1)
Cilium and associated proteins [BR:
ssen03037
]
Other cilia and associated proteins
Stereociliary proteins
122777248 (cldn1)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
122777248 (cldn1)
Exosomal proteins of colorectal cancer cells
122777248 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF6479
DUF7319
OppC_N
Motif
Other DBs
NCBI-GeneID:
122777248
NCBI-ProteinID:
XP_043894284
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All DBs
Position
LG1:complement(8530700..8533432)
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFTLAFLGFIGAIASTIMVEWKASSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLPGIVQGTRGLMLAAVLLNFIAIMVAVVGMRCTTCMVDQEEQKDKVAL
AGGIVFIIAGLLTLVGTSWYGHRIAKDFYNPFTPTNARYEFGSALYVGWGAACLIIIGGS
FLCCTCPAKGAGKSPRYPHTHSAGQTGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcaggaatacagctccttggcttcacactagccttcctgggcttcattggc
gcaatagcatccacgatcatggtggagtggaaagcttcatcctatgcaggagacaacatc
atcacagcccaggccatgtatgaaggattgtggaaatcctgtgtatcacagagcacaggc
cagatccagtgtaaagtctatgactcacttctccagctaccaggcattgtacagggcaca
cggggattgatgctggccgccgtcttgttgaatttcattgccatcatggtggcggtggtg
ggcatgagatgcaccacctgcatggtagatcaagaagagcagaaggacaaggtggcgctg
gctggaggaattgtcttcattatcgcaggtctgctcactctggtgggaacatcttggtat
ggtcacagaattgctaaggatttctacaacccattcactcctaccaatgcaaggtatgaa
tttggaagtgccttgtatgtgggatggggagctgcttgtctcatcattataggagggagc
ttcctgtgctgcacttgtcctgccaaaggtgcagggaaatctccacgctacccacacact
cactctgccggacagacgggcaaggactacgtctag
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integrated database retrieval system