Solea senegalensis (Senegalese sole): 122777410
Help
Entry
122777410 CDS
T07721
Symbol
myripb
Name
(RefSeq) rab effector MyRIP isoform X1
KO
K22237
Rab effector MyRIP
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122777410 (myripb)
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122777410 (myripb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
DUF155
Motif
Other DBs
NCBI-GeneID:
122777410
NCBI-ProteinID:
XP_043894575
LinkDB
All DBs
Position
LG1:complement(25378334..25473202)
Genome browser
AA seq
1062 aa
AA seq
DB search
MGRKLDLTGLTDDEAEHILKVVQRDMKLRKKEEDRLSEMKQELAEEGSRCSILSKQHRFN
EHCCIRCCAPFTFLLNPKRLCLDCQYNVCKNCCAYDKRDKAWLCSVCQKGRILRTQSLEW
YYNNVKSRFKRFGSAKVLKTLYRKHIIERGVLSDLPESSVHEGSTGNDNDGSICGSDSAF
YRQSEGHSMAETLTVALRVAEEAIEEAIAKAEEFSDSLEKQNEARYLRDHKEELIEELAT
TIVQKIIQRRKHSEMQTEYDFVWPQPQSLIQTSELPSPSQPHTSSQGPQEPLKTSYSLNR
SRSAFSLTSDDSPEKGPEAVGAGAGGDLQEYSSLKREAKATSLPSWKSVDRLDNSSASSV
LQSPDGNWIALHSSQLSRPSLLTKRKSLVFSVLEKESGVVSAYDEMGSDSEEDEGGWGAA
LRQFRRKLSDETYYTDSQHDPEWTYTQHLPVTSPSSGQYTNTETLNSDSEASSVLSACPR
KPPHHLQRKKGPPDTHLHPHHQPLYHQHLHQNFSPYPLHSEALDVNFNPKVMGDSSEAEE
SQSDPIKRSRRRRKSKRESSTEQSKAGGQSHTQSIYPLVQENSGFLLNALLKRGLSEEQP
ASDTVPMTTAASDTFGLDAMTPDPEDLDTVAPNSAALSPPQPHSLPPVSQHSASSSGPGD
PLEEELRSRLSQLVKRTNSKGNSSSEDECTKWPAERQADKPSDRQREKTRAKDTERERQR
LSDRLRETASDTVEHVNGQELKSSERLIKSPLTREQGRVRERRLEKGVESLEERVDAREP
MRGDKRETNRHSKRQHKRDVEKEKGGGGRSGSSASSPAVTPSSHEVVLPDNQERQNDLEQ
QRRLQLLSSLLQQQKYSAASLCSITTEVLKVLNATEELIGEAGGDSCTPTESMSASPISS
CSETRRLDQRLTKMEENVYLAAGAVYGLEGALGDLEQCARSISSGTTDTEMAFLEDQVAT
AAAQVQESEIQISNIEARISALKTAGLNVTVCNRFSKSKPKAKAHTLDSSRHQRRKLPAP
PLKVGARAATESVSAKVTVSSTSSPPGPLQSPRDRGHSHPVP
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaactggacctgacggggctgacggatgatgaagcggagcacatcctgaag
gtggtccaacgggacatgaagctgcgaaagaaggaggaagacaggctgagtgagatgaag
caggagctggcggaggagggcagcagatgctccatcctctccaagcagcaccgtttcaac
gagcactgctgtatccgctgctgcgcgcccttcacctttctgctcaaccccaagcgtctg
tgcctggactgtcagtacaacgtctgcaagaactgctgcgcctacgacaagagggacaaa
gcctggctctgctccgtgtgccagaagggcaggattttgagaacacagtccctcgaatgg
tattacaacaacgtgaagagtcgattcaagaggtttggcagtgccaaggttttgaagact
ctgtacagaaagcacattatcgagagaggtgtgctgtctgatctcccagaaagcagcgtt
cacgagggaagcaccggcaacgacaacgatggcagcatctgtggcagtgactctgccttc
tacagacagagcgaaggacacagtatggcagagaccctcacagtcgccctgcgtgttgct
gaggaggctatagaagaggccatcgcgaaggcagaggagttcagtgacagcttggagaag
cagaatgaggctcgatatctgcgggaccacaaagaggagctcatagaggaacttgctaca
accattgtacaaaaaatcatccagaggaggaagcattcggaaatgcagacagagtatgac
tttgtctggcctcaacctcagtctctgatccagaccagtgaacttccctctccgtctcaa
cctcatacttcttctcaaggaccacaggaacccctcaaaacctcttactccctcaacagg
tcacgctcagcgttttccctcaccagtgacgactccccagagaaaggtccagaggcggtg
ggcgcaggagcaggcggtgacctgcaggagtactcttctctgaagagggaggccaaggcc
acgtctctaccgagctggaagagtgttgatcgcctggacaactctagtgcatcctcagtg
ctgcagagtccagacggtaactggatcgcgctgcacagttctcagctgtctcggcccagt
ctgctgaccaagaggaagagcttggtattcagtgtgctggagaaggagtccggcgtcgtc
tcggcttacgacgagatgggatcggactcggaggaggacgagggcggctggggcgcagca
ctgagacagttccggcgcaaactgtccgatgaaacttactacactgactcgcagcatgac
ccggaatggacgtacacgcagcatcttcccgtgacctcaccgtcctctggccagtacacc
aacacagagactcttaactcggactctgaagcttcgtctgtgctgtccgcttgtccccgc
aaacctcctcatcacttgcagaggaaaaaaggaccaccggatactcacctgcaccctcat
caccaaccactgtaccaccaacaccttcaccagaacttctccccgtatcctctacattca
gaggcactggatgtgaacttcaaccctaaggtgatgggagacagcagcgaggctgaggag
agtcagagcgaccccattaagaggtcgcgccggcggcgaaaaagcaaaagagagtcctca
acggagcagagcaaggctggaggccagagccacacacagtccatctatccattagtacag
gagaacagtggtttcctgcttaatgcgctgctcaagaggggtttaagcgaggaacagcca
gcatcagacactgtgccaatgaccacagctgcatcggacacttttggattagatgccatg
acaccagatccagaagatttggacacagttgccccaaattcagctgccctaagtccacca
cagccccactctctacctccagtgtcccagcactcggccagcagctcagggcctggagat
cctctggaagaggaattaaggtccaggctgagtcagctggtcaaacgtacaaacagcaaa
ggcaacagctcatctgaggacgagtgcacgaagtggcccgcggagagacaggcagataaa
ccaagtgacagacagagagagaagacaagggcaaaagacacagaaagagagagacagcgg
ttaagcgacaggttaagagagacagcaagtgatacagtggaacacgtgaatggacaagaa
ttgaaaagcagcgagagactaattaagagtcctttgacgagagagcaaggacgagtcagg
gagaggaggttagagaaaggtgtggaaagcttggaagagagggtggatgcgagggagcca
atgagaggagataagagagagacaaatagacatagtaagagacaacataaaagagacgtg
gagaaggagaaaggaggaggagggaggagtggttcaagcgccagttcacctgctgttaca
ccttcttcccacgaggtggtgctgccagacaaccaggagagacagaatgacttggagcaa
cagcggaggcttcagttgctctcctctctcttgcaacagcagaagtactcggcggcctct
ctctgcagcatcaccacagaggtgctgaaggttttgaatgctacagaggagctgatcggt
gaggcgggaggcgacagctgcacgccgaccgagtccatgagcgcgtctccgatctccagc
tgctccgaaacccgcaggctggaccagaggctgaccaagatggaggagaatgtatacctt
gctgctggtgctgtgtatggccttgagggggcactgggagacctggagcagtgtgcccgc
agcataagtagtggtacaacggacacagagatggcattcctggaagaccaggtagctact
gctgctgctcaggtccaggagtctgaaatacagatatcaaacatagaggctaggatatca
gctctgaaaacagctgggttaaatgtgacagtctgcaatcgcttctccaagagcaagccg
aaggcaaaggctcacactcttgactcatcacgccatcaaagacggaagcttccagcacct
cctctgaaagttggagccagagcagcaactgaaagtgtgtctgccaaagtgacagttagc
agcacatcaagtcccccagggccccttcagagccccagggacaggggccattctcatcca
gtgccttga
DBGET
integrated database retrieval system
