Solea senegalensis (Senegalese sole): 122777457
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Entry
122777457 CDS
T07721
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122777457
03015 mRNA surveillance pathway
122777457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122777457
03041 Spliceosome [BR:
ssen03041
]
122777457
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122777457
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122777457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
DUF2457
Motif
Other DBs
NCBI-GeneID:
122777457
NCBI-ProteinID:
XP_043894655
LinkDB
All DBs
Position
LG11:complement(19104532..19111029)
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AA seq
771 aa
AA seq
DB search
MMQINLTGFLDGKNAREFMKDLWPLLLSAQENIAGIPSAFLEQKKEEIKQRQIEQEKLAS
LKKMDEDKKEKDTRERAQSKSPRRRKTRSPSPRRRSPVKRERKRSPSRSPRRKPSPVGGS
SPPPPLMQLPTKPVEPIVEPDTSGQALPEPVVQEASSTCDIVVEVVKADSQQVTEVKEPT
PEKTQKKEERPRSREREKESRRERPHHRSRSHSRSRRRRSRSRSYSPRRRPSPRRRMSPR
RRSPPRRGPTNSRHRHRRSPPRRRRSRSASSSGSSSSGSGSAKKAAKRLSNTPPRKPLHH
RDASISPAGKDRRSPSPRARRGRASASPPRSGLKQKAGGRGDSPFKPRHSDRSESEEDKN
EKGATADSVQQRRQYRRQNRQSSSDTGSSSSEDEAPKRPAAGPGARNGEVRRRRSRTPSP
RRRHRDPSPRKRRSPSPGRRRRTPSPPRRRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQ
RRYSPSPLPPQRRKLSSSPAKRSSPVAKRHSSRSPKRRSSPPHRRRSPPRSSPPRHRRSP
MLPSSWQSRDTRSPAAEAHRMSPSPVNRGRAVRSSPSPQGRFETSSTSPSNHRRQQSPSH
SGKPIRRVSRTPEPRSNQRSSPSPQPMRRASSRSRSVSPQPAAHKRPVAKSASPSPAHSA
SGSPPAAKKARSVSGSQSPSKNSDIDGSGKKKKKKKEKKHKKHKKEKKHKKHKKEKTGAT
GAGDGQENQVVEEDGDSRKESESEVDDSLDDLEKHLREKALRSMRKAQLSP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagatcaacctgacaggttttctggacggaaagaatgcccgggagttcatgaag
gacctgtggcccctgctgttgagtgcccaggagaacattgctggcatcccctctgctttt
ctggaacagaagaaagaggaaattaaacagagacagattgaacaggagaagctagcttct
cttaagaagatggatgaggataagaaggaaaaggacaccagagagagagctcagtcaaaa
agtccaagaagacgaaagacaaggtcgccatccccacgacgaaggtcgccggtgaagcgg
gaaaggaaacgcagcccatctcgctccccaaggcgcaaacccagtccagttggtggcagt
tcaccacctccaccgctgatgcagctgcccacgaaacctgtggagccgatcgtggaaccc
gatacatcaggacaggccctgcctgaaccagtggttcaagaagcttcttccacctgtgat
atagttgtggaggtggtgaaagcagactcacagcaggtcacagaggtcaaagaacccact
ccagagaaaacacaaaagaaagaagaaaggccccggtctcgagaaagggagaaggaaagc
aggagggaaagacctcatcaccgatcccgttctcattcccgttctcgcagacgacgttct
cgttctagatcttactcccctcgtagaagaccaagtcccaggaggaggatgtctcctcgt
cgcaggagtccccctcgacgtggtcccaccaactccagacacagacacagacgctcccca
cctcgcaggaggcgctctcgctctgcttcatcctctggcagcagctcttcaggctctggc
tcagctaaaaaagctgcgaaacgactatcaaacacacccccccgaaaaccgctgcatcac
agagatgcctccattagccccgcagggaaagacagacggtcgccgtctcccagggccaga
agaggacgggcttcagcttccccacccagatcgggtttaaagcagaaagcaggaggaagg
ggtgattctccttttaagcctagacattctgacaggtctgagtcagaagaggataaaaat
gaaaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcaggcagaatcga
cagtcgtcttcagatacagggtcttcctcctcagaagatgaagcccccaagaggcctgca
gcggggcctggagccagaaacggtgaagtcaggaggagaagaagccgcacaccttcccca
aggaggcgacacagggatccatctccaaggaaaaggcgttctccatctcctgggcgcaga
cgccgcaccccttctcccccacgacgccgcagatccccctctcctcctagacgcaggtct
ccttccccacctcctcgccgacgatctccatctcccagacgatattcgccccctatccag
cgtcgctacagcccctcacctttgcctccacagaggaggaagttgtccagctcacctgca
aagcgctcctccccagttgccaagcgacattcctccaggtctcccaagcgcagaagttct
cctcctcacaggagacgttcacctccacgctcatcgccacccagacacaggaggagtccc
atgttaccgtcaagctggcaaagcagggatacacgatctcctgctgcagaagcacaccgc
atgtccccatcccccgtaaaccgtggtcgcgctgtcaggagttcccccagtccccagggt
cgttttgaaacctctagcacatccccatctaaccatagaagacaacagtccccttcacac
agtggcaaacccatccgcagagtgtcacgcaccccagagccgcgtagcaaccagagatcc
tctccaagtccccagcccatgagaagagcatcttccagatctagatccgtttcccctcaa
ccagcagctcataagcgtccagttgcaaaatctgcctccccctcaccagctcactctgcc
agtggttccccaccggcagctaaaaaggcccgcagtgtttctggcagtcagtctccaagc
aagaattctgacattgatggcagtggaaagaaaaagaaaaagaagaaggaaaagaaacac
aagaagcacaagaaagagaagaaacacaagaagcataagaaggagaagactggtgccact
ggtgctggagacggacaagagaaccaggttgtggaggaggatggcgactcaagaaaggaa
tcagagagtgaagtagatgacagcttggacgacctagagaagcacctaagagagaaagcc
ctgcgatccatgaggaaggctcagttgtctccataa
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