Solea senegalensis (Senegalese sole): 122777495
Help
Entry
122777495 CDS
T07721
Name
(RefSeq) low-density lipoprotein receptor-related protein 1-like
KO
K04550
low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor)
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122777495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122777495
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssen04090
]
122777495
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122777495
CD molecules [BR:
ssen04090
]
Proteins
122777495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
DUF5050
EGF_LRP2
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
122777495
NCBI-ProteinID:
XP_043894721
LinkDB
All DBs
Position
LG11:10448146..10506029
Genome browser
AA seq
2477 aa
AA seq
DB search
MAMRCFYLGFIILYLGIVSPNGASVVPKVDNHPKNCSTKQFVCKDQVTCISKGWRCDGEK
DCPDGSDESPDICTHNRVNQCPVNEHGCLDVDLCIHMSKLCDGVPDCTDGWDEGPHCRKR
APDCASNGCQFHCAVTHDGPQCYCRNGFEVAADGKTCKDFNECNVYGTCSQTCTNTEGSY
TCSCVEGYLLQPDNRSCKAKNEPVDRLPVLLIANLHDIRCTSLSGTTSWLPSIATKQAMA
MDFIYAKETVCWIDVGDTPAATQLKCANIPDLKTVANIRTINISLSLHHVEQMAIDWLTG
NFYFVDDVDDRVFVCNKNGQTCVTLLDQELYNPKGIALDPAMGKVFFTDYGSTPRVERCD
MDGQNRTKLVESKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTIIQGLLIKH
LYGLTVFENYLYATNSDEGNLNPKTSVIRVNRFNSSDFQVVTRVDRGPALHVYHQRRQPQ
VRSHACALDQFGKAGGCSDICLLSNSHKTRTCRCRSGFSLGSDGKSCKKPDHELFLVYGK
GRPGIIRGMDMNAKVPDEYMIPIENLMNPRALDFHAASEFIYFADATSYIIGRQKIDGTE
RDTILKEGIHTVEGIAVDWMGGNLYWTDDGPKKTISVARLEKASQTRKTLIEGKMSHPRA
IVVDPQHGWMYWTDWEEDPTESNRGKIKKAWMDGSHHQVFLTSKTVLWPNGLSLDIPQGI
LYWVDAYYDRIELVYLNTTERKVVYEGQELNHAFGLCHYKQFLFWNEYRGGSIYKLDQVT
KTVTLLRNERPPIFEIRVYDAHQQQGSNACRVNNGGCSSLCLAIPDSRSCGCADDQILDA
DNVTCKANPSYVPPPQCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPA
DRFKCQNNRCIPLRWLCDGDNDCGNDEDESNTTCSARTCPPNQYPCASGRCIPISWTCDL
DDDCGDRSDEPDSCAYPTCFPLTQFTCANGRCININWRCDNDNDCGDNSDEAGCSHSCSS
VQFKCNSGRCIPEYWTCDGDNDCGDYSDETHANCTNQATRPPGGCHVDEFQCRMDGLCIP
MRWRCDGDTDCMDLSDENNCEGVTHMCDPAVKFSCRDSARCISKAWVCDGDSDCEDNSDE
DNCEPLECKLSHHMCATNDSICLPAEKLCDGTDDCPDGSDEKLCDLCALDNGGCSHNCSI
IPGEGFMCSCPLGMELGSDNKTCQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELEADM
ESCKSTDPFKPFIIFSNRHEIRRIDLHKGEFSVLVPGLRNTIALDFHLNQSTLYWTDVVE
DKIYRGKLSDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESKLDQIEVAKLDGTMR
TTLLAGEVEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGEGRRTIHRETGSGGWPNG
LTVDYMERRIVWIDARSDAIYSAMYDGSGLIEVLRGHEYLSHPFAVTMYGGEVYWTDWMT
NTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPEAPNPCATRDGKGPCSHLCLINFN
QTFSCACPHLMKLQADKRTCKESHKFLLYARQIEIRGVDIDNPYYNYIISFTVPDIDNVT
AVDYDAVEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNANGLAVDWVSRNLFWTSYD
ANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLLGKLYWTDGDNISMANMDGTNHTTLF
TSQKGPVGLSIDYEKEQLYWISSGNGTINRCQMDGSKLEILEGVKGKLTKASALAVMGDK
LWWADQGMAQIGTCDKNNGGNWRVLRNNTSPMMHMRIYDEDVQKARINLCSNNNGDCSQL
CLPTSPTTRACMCTAGYSLKTGQQSCEGMGSFLLYSVHEGIRGIPLDPVDKSDALVPVSG
TSLAVGIDFHADNDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGITVDWIAGNIY
WTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPVKGYLFWTEWGQYPRIERSRLDG
SQRLVLVNSSISWPNGISIDYEEGFLYWCDARTDKIERINLETGDNREVVLANNNMDMFA
VSVFEEYIYWSDRTHANGSIKRGSKDNATDAVQLRSGIGVQLKDIKVFNRARQQGTNVCK
HNNGGCEQLCLYRGNGQHTCACAHGMLAEDNCSCRDYDGYLLYSERTILKSIHLSDETNL
NAPIKPFEDPDHMKNVIALSFDYHGGGGKAANRIFFSDIHFGNIQQINNDGTDRKIVVDN
VGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRTVAYNRNTVVTMSGEDHPRAFVLDE
CQDLMFWTNWNELSPSIMRASLNGANMLVIIGSDIKTPNGLAIDHRAEKLYFSDATLDKI
ERCEYDGSNRYVLLKNEPVHPFGLAVYGDYIFWTDWVRRAVLRADKYTGGDMKVLRADIP
QQPMGIVAVANDTNSCE
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaggtgcttctacttgggatttattatactctacttggggatcgtctctcct
aacggtgcatccgtagttcccaaagtggacaaccatccgaaaaactgcagcactaagcag
tttgtatgcaaggaccaggtgacctgtatctccaaaggctggcgctgcgatggagagaag
gactgtccagatggctcagacgaatcaccagatatctgcacgcacaacagagtcaaccag
tgtcccgtcaacgagcatgggtgcctggacgtggatttgtgtatccatatgagcaagttg
tgcgacggagtccccgactgcaccgatggctgggacgagggtcctcactgcagaaaacga
gcaccagactgtgcctccaatggctgccagttccactgcgctgtgactcacgacgggcct
cagtgctactgtagaaacggctttgaggttgctgcagatgggaagacgtgtaaagatttc
aatgagtgcaacgtgtacgggacgtgtagtcagacttgtacgaacaccgagggctcctac
acctgcagctgtgtagaaggctacctgctgcagccagacaaccgctcttgtaaagccaaa
aacgagccagtggatcgtctgcctgtgctgctgattgcgaaccttcatgacatccgctgc
acctcgctcagtggcaccacatcctggctgccctccatcgccacaaagcaggccatggcc
atggacttcatttatgccaaggagaccgtctgctggatagatgtgggcgacacacctgct
gccacccagctgaagtgtgccaacatccccgacctcaagactgtcgccaacattcggacc
attaacatctccctcagcctgcaccatgttgagcagatggctatcgactggttgaccgga
aacttctactttgtggatgatgtggacgaccgggtgtttgtctgcaacaagaacggccag
acatgtgtgaccctgctggaccaggagctgtacaaccctaaaggcattgctttggacccg
gcgatgggtaaagtgttcttcacagattatgggtcgacgccgagggtggagcgctgtgac
atggacggccagaatcgcactaagctggtggagagcaagattgttttccctcatggtatc
accctggacctggtcaaccggctggtgtactgggctgatgcctacctggactacattgaa
gtggttgattatgagggcaaaaaccgacacaccatcatccagggcctactgattaagcac
ctatacggattgaccgtctttgagaactatctgtatgctacaaactcggacgaaggcaac
ctcaacccaaagacgagcgtgatccgagtgaaccgcttcaacagctccgacttccaggtg
gtgactcgagtagaccgggggcccgcgctgcacgtgtaccaccagaggcgccaacctcaa
gtgcgcagccacgcgtgtgccttggatcagtttgggaaagccggaggttgttctgacatc
tgtctgctaagcaacagccacaagactcgtacctgccgctgtcgctctggattcagcctc
ggcagtgacggcaagtcctgcaagaaaccagaccatgagttgttcttggtgtatggtaag
ggtcgtcccggaatcatcaggggcatggacatgaatgctaaggtacccgatgagtacatg
atccccatcgagaacttgatgaacccccgagctctggatttccacgctgccagtgaattc
atctacttcgctgatgccaccagctacatcattgggcgacagaagatcgatggcacggag
agagacaccattctgaaggaaggtatccacacagtggaggggatagcagtagactggatg
ggaggtaatctctattggacagatgacgggcctaagaaaaccatcagtgttgccaggctg
gagaaagcttcacagacccgcaagactctcattgagggaaagatgagtcatcctcgtgcc
attgtggtcgacccccagcatggatggatgtactggaccgattgggaggaggaccccaca
gagagcaacagagggaagatcaagaaggcctggatggacggttcacatcaccaagttttc
ctgaccagcaaaacagtgctgtggccaaacggcttgagtctggacattcctcagggcata
ctgtactgggtagatgcctactatgaccgaattgagttggtttaccttaacaccactgag
cgaaaggtggtgtatgaggggcaagagcttaaccacgcctttggtttatgtcattacaaa
caattcctgttttggaatgagtatcgtggaggcagcatctataaactggaccaggtcacg
aagacagtcacactactccgcaatgagaggccacccatatttgagattagagtgtatgat
gcacaccagcagcaaggttccaatgcatgtcgagttaacaacggtggctgtagcagcctg
tgccttgctatccctgacagcaggtcctgcggctgtgctgacgaccaaatcttggatgcc
gataatgtcacctgtaaagccaacccctcctacgtgcctccgccccagtgccagcccggg
gagtttgcctgcaagaacaaccgctgcatccaggagcgctggaagtgtgatggggacaat
gattgtctggacaacagcgatgaggcccctgagctctgccaccagcacacgtgcccagct
gaccgattcaagtgccagaacaaccgctgcatccccttgcgctggctctgtgatggcgac
aatgactgcggcaacgatgaagatgaatccaataccacctgctctgctcgtacatgcccc
cccaaccagtatccctgtgccagtggacgctgcatccccatctcctggacgtgtgacctg
gacgacgactgtggagaccgctcggacgaaccagactcctgtgcctacccaacctgcttc
cctctgacacagttcacgtgtgccaacggccgatgcatcaacatcaactggcgctgtgac
aatgacaacgactgcggagacaacagtgacgaagcggggtgcagccattcctgctccagt
gtccagttcaaatgtaacagtggtcgctgcattccagaatactggacctgtgatggcgac
aatgactgtggggactacagtgacgagacacatgccaactgtaccaaccaggcgactcgt
cctccaggcggttgccatgtcgatgagttccagtgtcggatggacggcctgtgcatcccc
atgcgttggcggtgtgatggtgatacagactgcatggacctgagtgatgagaataactgt
gagggtgtcacccacatgtgtgaccctgcggtcaagttcagctgcagagactctgctcgc
tgcattagcaaggcctgggtgtgcgatggtgacagtgactgtgaggacaactcggacgag
gacaactgtgagccgctggagtgcaagttgtctcaccacatgtgcgctaccaatgattcc
atctgtctgcccgctgagaagctgtgtgatggcaccgacgattgtccggacggatctgat
gaaaaactgtgtgatttgtgtgcactggacaatggtggttgcagtcacaactgcagcatc
atccctggggagggtttcatgtgctcttgtcccctgggtatggaactgggatcggacaac
aagacctgccagattcagagcttctgtgccaaacacctcaagtgcagccagaagtgcgag
caagagaaatccagcgttaagtgctcctgctacgagggctgggagctggaggctgacatg
gagagctgcaaaagcactgatcccttcaagcctttcatcatattctccaaccgtcatgag
atcagaaggattgatcttcacaagggggagttcagtgtgttggtaccaggcctgaggaac
accatcgccttggacttccacctcaaccagagcacactgtactggactgatgtcgtggag
gacaaaatctaccgtgggaaactgtctgataatggagccctgaccagtttcgaggtggtt
atccagtatggattggctactccagaaggcctggctgtggactggatagcaggaaacatc
tactgggtcgagagtaaactggaccaaatagaagtggccaaactggatgggaccatgaga
accactctgctggctggggaggtggaacacccccgggctattgccctggaccctcgtgat
ggtattctcttttggaccgactgggatgccagtctgcccaggattgaagcagcatctatg
agtggtgaaggcagacgcaccatccacagggaaacgggcagcggcgggtggcccaacgga
ctcactgtggattacatggaaagacgcattgtctggattgatgcgaggtcagatgccatc
tactctgctatgtatgacggctctgggctgatcgaagtgctgcgtggtcatgaatacttg
tcccatccctttgcggtcaccatgtatggaggcgaggtctactggacagactggatgaca
aacactttggccaaagccaacaaatggacggggcataacgtgactgtagtccagcgcacc
aacacgcagccatttgacctgcaggtctatcacccatccaggcaacctgaggctcccaac
ccatgtgccaccagagacggcaaaggcccgtgctcccacctttgtctcatcaactttaac
cagaccttctcctgtgcctgcccacacctcatgaaactgcaggctgacaaacgaacctgc
aaagagtcccacaagttccttctttatgctcgtcagattgagatccgaggtgtcgacata
gacaatccctactacaactacatcatctccttcactgtgccagacatagacaatgtgacg
gcagtggactacgatgccgtggagcatcgtatctactggtcagatgttcgaacacagacc
atcaagagagctttcatcaatggcacaggggtggagacagttgtttctgctgatctccct
aatgctaatgggctggctgtggactgggtgtccaggaatcttttctggaccagctatgat
gccaacaagaagcagatcaatgtggcccgacttgatggatctttcaagaatgctgttatc
cagggattagacaagccccactgtttggtggtgcaccctctgctggggaaactttactgg
actgacggtgacaacataagcatggccaacatggatggtaccaatcacacaacacttttc
accagtcagaagggaccagtaggcctttctattgattatgaaaaggagcagctctactgg
attagttcaggaaatggcaccattaaccgttgccagatggatggatctaaactggagata
ctggaaggtgttaaaggcaaacttaccaaggctagtgcactagctgttatgggagacaag
ctgtggtgggcagatcaaggaatggcccagataggaacgtgtgacaagaacaatggagga
aactggagggttctgcgaaacaacacctcgcctatgatgcacatgaggatctacgatgag
gatgtgcagaaagcgcgaatcaacctgtgcagtaacaacaatggtgactgctcccagctg
tgtctccccacctcaccaacaaccagggcctgcatgtgcaccgcagggtacagcctcaag
acaggacagcagtcctgtgaaggtatgggctcgttccttctatactctgttcacgaggga
atcagaggaattcctctcgacccggtagacaaatctgacgccttggtgccggtgtctggc
acctctttggctgtcggcatcgacttccacgctgataatgacaccatctattgggtggac
atgggcctgagcactatcagcagggctaagagagatcagacatggagagaagacgtggtg
accaatggcatcggccgggttgaggggatcactgttgactggatagcaggaaatatttac
tggactgaccagggctttgacgtgattgaggttgccaggctgaatggctctttccgctat
gtagtcatttcccagggcctggacaaacccagagccatcactgtccacccagtgaaagga
tatctgttctggactgagtggggtcagtaccctcgtattgagcgttctcggttggatggc
tcccagaggttggtcctggtcaattccagcatcagttggccaaatgggatctctatcgac
tacgaggaggggtttctgtactggtgcgatgcgaggacggacaagattgagcgcatcaat
ctggagactggagacaacagggaggtggtgctggccaacaacaacatggacatgtttgcc
gtgtctgtttttgaggagtacatttactggagcgacaggactcatgccaacgggtccatc
aagagaggcagtaaagacaatgctacagatgctgtgcagctcaggagtggcattggtgtc
cagctgaaggacatcaaggttttcaacagggccaggcagcaaggcacaaacgtctgcaaa
cacaacaatggcggctgtgaacagctgtgtctttatcgtggcaacggacagcacacctgt
gcctgtgctcatggcatgttggcagaggacaactgcagctgccgtgactatgatggatac
ctgctgtactcggagcggactatcttgaagagcatccacctctctgatgagaccaacctt
aacgcgccgataaagccgtttgaggaccccgatcacatgaagaatgtcatcgccctcagc
ttcgactaccacggcggtggagggaaggcggccaaccgcatcttcttcagcgacatccac
tttggcaacatacagcagatcaacaacgacggcacagatcgcaagattgtggtggacaat
gttgggtctgttgagggcctggcataccaccgcggttgggatacactctactggaccagt
tacacaacctccaccatcactcgacacactgtggatcagagccgcactgtggcctataac
cgcaacactgtggtcactatgtctggagaggaccaccccagagcctttgtgctggacgag
tgtcaggatctcatgttctggaccaactggaatgagctgtctcccagcattatgagggct
tctctgaatggagccaacatgctggtgatcatcggcagtgatatcaaaactccaaatggc
ctcgccatcgatcaccgagctgagaaactctatttctctgatgccaccttggacaagatt
gagcgctgtgaatatgatggaagcaatcgttacgttttattgaagaatgagcccgtccat
ccgttcggtctggctgtgtacggagattacatcttctggactgactgggtgaggagggca
gtccttcgagccgacaagtacacaggaggagacatgaaagtgttgcgcgcagacatccct
cagcagccaatgggcatcgttgctgtggcgaatgacaccaacagctgtgagtag
DBGET
integrated database retrieval system
